Factsheet for VIT_14s0108g01410.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_02s0025g02980.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39400.1	VIT_02s0025g02980.t01	AT4G01480.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026263.1-P	Field mustard	nucleus	49.53	64.63
CDY24016	Canola	extracellular	30.84	64.08
KRH44965	Soybean	cytosol	70.09	35.97
PGSC0003DMT400059435	Potato	cytosol	67.76	35.02
Solyc03g013310.2.1	Tomato	cytosol	67.29	34.87
CDX74467	Canola	cytosol, mitochondrion, nucleus, plastid	66.82	34.62
AT5G39400.1	Thale cress	nucleus	65.89	34.22
Bra028431.1-P	Field mustard	nucleus	66.36	34.13
CDX67428	Canola	nucleus	66.36	34.13
CDY37003	Canola	nucleus	65.89	33.89
CDY70932	Canola	extracellular, golgi	33.64	32.88
Bra028240.1-P	Field mustard	plastid	65.42	29.17
CDY37863	Canola	mitochondrion	64.02	28.07
VIT_07s0031g00020.t01	Wine grape	cytosol	35.51	15.7
VIT_03s0180g00020.t01	Wine grape	cytosol	38.32	13.51
VIT_01s0137g00100.t01	Wine grape	cytosol	9.81	10.24
VIT_14s0108g01400.t01	Wine grape	cytosol	5.14	6.63

Protein Annotations

MapMan:18.4.23.2.1	Gene3D:3.90.190.10	ProteinID:CBI22276	ProteinID:CBI22276.3	UniProt:D7SXH9	InterPro:Dual-sp_phosphatase_cat-dom
EMBL:FN595239	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0006464	GO:GO:0006470
GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
GO:GO:0019538	GO:GO:0035335	InterPro:IPR029021	InterPro:IPR029023	PFAM:PF00782	ScanProsite:PS00383
PFscan:PS51181	PANTHER:PTHR12305	PANTHER:PTHR12305:SF80	InterPro:Prot-tyrosine_phosphatase-like	SUPFAM:SSF52799	InterPro:Tensin_phosphatase
InterPro:Tyr_Pase_AS	UniParc:UPI0001BE2260	ArrayExpress:VIT_14s0108g01410	EnsemblPlantsGene:VIT_14s0108g01410	EnsemblPlants:VIT_14s0108g01410.t01	:

Description

No Description!

Coordinates

chr14:-:29985955..29991984

Molecular Weight (calculated)

24680.9 Da

IEP (calculated)

9.872

GRAVY (calculated)

-0.324

Length

214 amino acids

Sequence
(BLAST)

001: MGLTFSEQGP GRFASNSLLQ YQLINYLTRT LYIRNLVSKQ RRRMLVGGYD LDMSFITGRL LAMSFPAERM QAIFRNPLWQ VKDVLDMRHN GHYKVYNLRV
101: EESYDPLHFH GRVETFPFDD HHIPPLQTIK LFCKNVHSWL SSHPKNIAVV HCMAGKGRTG LTVCAYLVYT GMSAEEALKL HADKRTTNNE GVSIPSQRRY
201: VGYWESLLAF HKGS

Best Arabidopsis Sequence Match ( AT5G39400.1 )
(BLAST)

001: MGLKLSRGPV KEKSPLEFTR VHILTYFTTN SYLRNLVSKK RRRLIIGGYD LDMSYISDKL LAMSFPAERM RAVYRNPLWQ VKSVLDMRHP DHYKVYNLCI
101: EESYDPDNFY GRVERFPFDD NHVPSLKMIQ LFCESVHSWL SLDPKNIAVV HCMAGKGRTG LMVSAYLVYG GMSAEEALEM YASRRTTNNN GVSIPSQRRY
201: VKYWSDLLSF SKKGPPEVKL PQEHSRELLR IRLYDTANVD SVFFVVSELQ EVPNEMYRPS VELARGCCRQ FKKGYCRSSS PRYYISHVNC DSEEDEEVTD
301: GEEPHLVVQM DTESSIIDEK TCLDFYFDKP VRVSGDIRIT FYQKMIGSRL FYTCFNTAFI TNGLLQFSIG ELDKVGGNGR SISGPDFSLE LLFGPACSKF
401: GKFLSRDDLS LS

Arabidopsis Description

PTEN1Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.