Factsheet for Bra028240.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 3
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra008551.1-P
Bra037416.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39400.1	Bra008551.1-P	AT4G01480.1	21798944
AT5G39400.1	Bra037416.1-P	AT4G01480.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74467	Canola	cytosol, mitochondrion, nucleus, plastid	85.42	99.27
AT5G39400.1	Thale cress	nucleus	80.21	93.45
Bra028431.1-P	Field mustard	nucleus	78.33	90.38
Bra026263.1-P	Field mustard	nucleus	30.0	87.8
CDY37863	Canola	mitochondrion	88.96	87.5
KRH44965	Soybean	cytosol	57.08	65.71
VIT_14s0108g01410.t01	Wine grape	cytosol	29.17	65.42
PGSC0003DMT400059435	Potato	cytosol	52.08	60.39
Solyc03g013310.2.1	Tomato	cytosol	50.62	58.84
Bra012908.1-P	Field mustard	cytosol	20.21	17.35
Bra022420.1-P	Field mustard	cytosol	20.21	16.47
Bra038209.1-P	Field mustard	cytosol	20.0	16.27
Bra022421.1-P	Field mustard	cytosol	20.21	16.11

Protein Annotations

MapMan:18.4.23.2.1	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	EnsemblPlantsGene:Bra028240	EnsemblPlants:Bra028240.1	EnsemblPlants:Bra028240.1-P
InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0006464	GO:GO:0006470
GO:GO:0006629	GO:GO:0007275	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009555
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	GO:GO:0035335
GO:GO:0046856	GO:GO:0052866	InterPro:IPR014020	InterPro:IPR029021	InterPro:IPR029023	UniProt:M4EHH5
PFAM:PF00782	PFAM:PF10409	ScanProsite:PS00383	PFscan:PS51181	PFscan:PS51182	PANTHER:PTHR12305
PANTHER:PTHR12305:SF80	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01326	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom
InterPro:Tensin_phosphatase	InterPro:Tyr_Pase_AS	UniParc:UPI0002544966	SEG:seg	:	:

Description

AT5G39400 (E=4e-225) ATPTEN1, PTEN1 | PTEN1; phosphatase

Coordinates

chrA04:+:6999266..7001835

Molecular Weight (calculated)

55136.2 Da

IEP (calculated)

8.811

GRAVY (calculated)

-0.364

Length

480 amino acids

Sequence
(BLAST)

001: MELRRCSSRV SIFQVKQNSF SPKNNLKHFP FCFASRPSSS SSFSGSHLPS IWEPENRLLN LHDQFFRMGL KLSRGPGKEK STLQLTRVHI LTYLTTSYYL
101: RNLVSKKRRR LITGGYDLDM SYISDKLLAM SFPAERMRAV YRNPLWQVKS VLDMRHPDHY KIYNLCIEEC YDPENFYGRV ERFPFDDNHV PSLKMIQLFC
201: QSVHSWLSLD PKNIAVVHCM AGKGRTGLMV SAYLVYGGMS AEEALEMYAS RRTTNNNGVS IPSQRRYVKY WSHLLGERIG KGPPEVKLPQ EHSRELLRIR
301: LYDTANVDSV FFVVSELQEV PNEMYRPSVE LARGCCRQFK KGYCRSSSPR YYISHINCDS EEDEVLTAGE EPRLVVQMDT ESSIIDEKTC LDFYFDKPVR
401: VSGDIRITFY QKMIGSRLFY TCFNTAFITN GLLQFSIGEL DKVGGNGRSI SGPDFSLELL FSPATSISGK LLSRDDLSLS

Best Arabidopsis Sequence Match ( AT5G39400.1 )
(BLAST)

001: MGLKLSRGPV KEKSPLEFTR VHILTYFTTN SYLRNLVSKK RRRLIIGGYD LDMSYISDKL LAMSFPAERM RAVYRNPLWQ VKSVLDMRHP DHYKVYNLCI
101: EESYDPDNFY GRVERFPFDD NHVPSLKMIQ LFCESVHSWL SLDPKNIAVV HCMAGKGRTG LMVSAYLVYG GMSAEEALEM YASRRTTNNN GVSIPSQRRY
201: VKYWSDLLSF SKKGPPEVKL PQEHSRELLR IRLYDTANVD SVFFVVSELQ EVPNEMYRPS VELARGCCRQ FKKGYCRSSS PRYYISHVNC DSEEDEEVTD
301: GEEPHLVVQM DTESSIIDEK TCLDFYFDKP VRVSGDIRIT FYQKMIGSRL FYTCFNTAFI TNGLLQFSIG ELDKVGGNGR SISGPDFSLE LLFGPACSKF
401: GKFLSRDDLS LS

Arabidopsis Description

PTEN1Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.