Factsheet for Bra037416.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005553.1-P
Bra024408.1-P
Bra031849.1-P
Bra032616.1-P
Bra033292.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	Bra032616.1-P	AT1G01050.1	21798944
AT4G01480.1	Bra033292.1-P	AT1G01050.1	21798944
AT4G01480.1	Bra005553.1-P	AT2G32840.1	21798944
AT4G01480.1	Bra024408.1-P	AT5G65683.1	21798944
AT4G01480.1	Bra031849.1-P	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07141	Canola	cytosol	99.53	99.53
Bra008551.1-P	Field mustard	cytosol	96.26	96.26
Bra032616.1-P	Field mustard	cytosol	89.72	94.58
Bra033292.1-P	Field mustard	cytosol	92.99	93.87
KRH47754	Soybean	cytosol	87.85	88.68
AT4G01480.1	Thale cress	cytosol	88.78	87.96
Solyc08g083370.2.1	Tomato	cytosol	84.11	87.8
PGSC0003DMT400012843	Potato	extracellular	85.98	87.2
PGSC0003DMT400015012	Potato	cytosol	77.57	86.91
Bra040479.1-P	Field mustard	cytosol	87.38	86.57
Solyc12g055830.1.1	Tomato	extracellular	85.98	86.39
KRH68981	Soybean	cytosol	84.11	85.31
KRG97263	Soybean	cytosol	84.11	85.31
EER94266	Sorghum	cytosol	80.84	84.8
Solyc08g013680.2.1	Tomato	cytosol	43.93	84.68
Os10t0406100-01	Rice	cytosol	80.37	84.31
GSMUA_Achr6P19560_001	Banana	cytosol	83.18	83.96
GSMUA_Achr7P03170_001	Banana	cytosol	82.71	83.49
GSMUA_Achr3P22500_001	Banana	cytosol	82.24	83.02
TraesCS2D01G587100.1	Wheat	cytosol	81.31	82.46
Zm00001d026680_P003	Maize	cytosol	82.24	82.24
Os04t0687100-01	Rice	cytosol, plasma membrane	81.78	82.16
PGSC0003DMT400031865	Potato	cytosol	81.31	82.08
GSMUA_Achr8P07910_001	Banana	cytosol	80.84	81.6
VIT_02s0025g02980.t01	Wine grape	cytosol	81.31	81.31
KXG27493	Sorghum	cytosol	81.31	81.31
TraesCS2A01G576400.1	Wheat	golgi	81.78	81.02
TraesCS1B01G355800.1	Wheat	cytosol	77.1	80.49
Bra039808.1-P	Field mustard	cytosol	81.31	80.18
TraesCS2B01G611000.2	Wheat	cytosol	80.84	79.72
Os01t0866500-01	Rice	cytosol	78.97	79.72
TraesCS1D01G273500.1	Wheat	cytosol	80.37	79.63
TraesCS1B01G283300.1	Wheat	cytosol	80.37	79.63
Zm00001d010171_P002	Maize	cytosol, extracellular	83.18	79.46
TraesCS1A01G273500.1	Wheat	cytosol	79.91	79.17
TraesCS1A01G342700.1	Wheat	cytosol	75.7	79.02
TraesCS1D01G344800.2	Wheat	cytosol	75.7	79.02
Os05t0438500-01	Rice	cytosol	82.71	79.02
Bra007016.1-P	Field mustard	cytosol	79.91	78.8
EES18298	Sorghum	cytosol	84.11	78.6
KRH06335	Soybean	cytosol	81.31	78.03
OQU87920	Sorghum	cytosol	59.35	76.97
KRG98973	Soybean	cytosol	69.16	75.51
TraesCS3B01G077900.2	Wheat	plastid	81.78	73.22
HORVU1Hr1G075660.1	Barley	cytosol	77.57	73.13
HORVU1Hr1G075110.1	Barley	plastid	75.7	69.83
Bra037229.1-P	Field mustard	cytosol	71.03	69.41
Zm00001d002889_P002	Maize	cytosol	81.31	68.77
KRG99305	Soybean	cytosol	60.75	64.68
KRH72403	Soybean	cytosol	40.65	64.44
KRG88877	Soybean	cytosol	34.58	64.35
GSMUA_Achr5P26130_001	Banana	plastid	83.18	61.17
Os01t0322300-00	Rice	cytosol	20.56	59.46
HORVU6Hr1G058900.2	Barley	cytosol	37.85	45.0
HORVU2Hr1G065020.1	Barley	cytosol	25.23	39.13
Bra039627.1-P	Field mustard	plastid	71.5	22.43
Bra009396.1-P	Field mustard	plastid	28.97	20.81
Bra006029.1-P	Field mustard	plastid	28.04	20.27
Bra028625.1-P	Field mustard	plastid	10.75	13.86

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	EnsemblPlantsGene:Bra037416	EnsemblPlants:Bra037416.1	EnsemblPlants:Bra037416.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649	UniProt:M4F8K4	HAMAP:MF_00209	PFAM:PF00719
ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF37	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324
UniParc:UPI0002542081	:	:	:	:	:

Description

AT1G01050 (E=2e-113) AtPPa1 | AtPPa1 (Arabidopsis thaliana pyrophosphorylase 1); inorganic diphosphatase

Coordinates

chrA09:-:627310..628768

Molecular Weight (calculated)

24613.6 Da

IEP (calculated)

5.970

GRAVY (calculated)

-0.424

Length

214 amino acids

Sequence
(BLAST)

001: MSEEVKENQS DKLQRTAPRL NERILSSLSR RSVAAHPWHD LEIGPGAPSI FNVVIEISKG SKVKYELDKK TGLIKVDRIL YSSVVYPHNY GFIPRTLCED
101: NDPLDVLVIM QEPVLPGCFL RARAIGLMPM IDQGEKDDKI IAVCVDDPEY KHYTDIKELP PHRLSEIRRF FEDYKKNENK EVAVNDFLPN GPAVEAIQYS
201: MDLYAEYILH TLRR

Best Arabidopsis Sequence Match ( AT1G01050.2 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.