Factsheet for PGSC0003DMT400015012

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400012843
PGSC0003DMT400015012
PGSC0003DMT400016192
PGSC0003DMT400031865
PGSC0003DMT400078676

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	PGSC0003DMT400012843	AT1G01050.1	21798944
AT4G01480.1	PGSC0003DMT400015012	AT1G01050.1	21798944
AT4G01480.1	PGSC0003DMT400031865	AT1G01050.1	21798944
AT4G01480.1	PGSC0003DMT400016192	AT2G32840.1	21798944
AT4G01480.1	PGSC0003DMT400078676	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g013680.2.1	Tomato	cytosol	50.79	87.39
PGSC0003DMT400031865	Potato	cytosol	93.19	83.96
PGSC0003DMT400012843	Potato	extracellular	91.1	82.46
Bra032616.1-P	Field mustard	cytosol	85.34	80.3
GSMUA_Achr6P19560_001	Banana	cytosol	89.01	80.19
CDY32448	Canola	cytosol	86.39	80.1
GSMUA_Achr7P03170_001	Banana	cytosol	88.48	79.72
KRH47754	Soybean	cytosol	88.48	79.72
GSMUA_Achr3P22500_001	Banana	cytosol	88.48	79.72
CDY55328	Canola	cytosol	85.86	79.61
GSMUA_Achr8P07910_001	Banana	cytosol	87.96	79.25
TraesCS2D01G587100.1	Wheat	cytosol	87.43	79.15
EER94266	Sorghum	cytosol	84.29	78.92
Os04t0687100-01	Rice	cytosol, plasma membrane	87.96	78.87
Zm00001d026680_P003	Maize	cytosol	87.96	78.5
CDY15206	Canola	cytosol	85.86	78.47
KXG27493	Sorghum	cytosol	87.43	78.04
Os10t0406100-01	Rice	cytosol	83.25	77.94
AT1G01050.1	Thale cress	cytosol	86.39	77.83
Bra037416.1-P	Field mustard	cytosol	86.91	77.57
CDX90003	Canola	cytosol	85.86	77.36
Bra033292.1-P	Field mustard	cytosol	85.86	77.36
AT2G46860.1	Thale cress	cytosol	87.43	77.31
TraesCS2A01G576400.1	Wheat	golgi	87.43	77.31
KRG97263	Soybean	cytosol	85.34	77.25
CDY07141	Canola	cytosol	86.39	77.1
CDY01933	Canola	cytosol	85.86	76.64
Bra008551.1-P	Field mustard	cytosol	85.86	76.64
CDX97250	Canola	cytosol	85.86	76.64
CDY27516	Canola	cytosol	86.39	76.39
CDY48009	Canola	cytosol	86.39	76.39
Bra040479.1-P	Field mustard	cytosol	86.39	76.39
KRH68981	Soybean	cytosol	84.29	76.3
TraesCS2B01G611000.2	Wheat	cytosol	86.39	76.04
AT4G01480.1	Thale cress	cytosol	85.86	75.93
KRG98973	Soybean	cytosol	76.96	75.0
Os05t0438500-01	Rice	cytosol	87.43	74.55
Zm00001d010171_P002	Maize	cytosol, extracellular	87.43	74.55
Os01t0866500-01	Rice	cytosol	82.72	74.53
VIT_02s0025g02980.t01	Wine grape	cytosol	82.72	73.83
EES18298	Sorghum	cytosol	88.48	73.8
TraesCS1B01G355800.1	Wheat	cytosol	79.06	73.66
PGSC0003DMT400023069	Potato	cytosol	83.25	73.61
TraesCS1B01G283300.1	Wheat	cytosol	82.72	73.15
TraesCS1D01G273500.1	Wheat	cytosol	82.72	73.15
PGSC0003DMT400009045	Potato	cytosol	81.68	72.9
TraesCS1A01G273500.1	Wheat	cytosol	82.2	72.69
TraesCS1D01G344800.2	Wheat	cytosol	77.49	72.2
TraesCS1A01G342700.1	Wheat	cytosol	77.49	72.2
OQU87920	Sorghum	cytosol	60.73	70.3
TraesCS3B01G077900.2	Wheat	plastid	87.43	69.87
KRH06335	Soybean	cytosol	81.15	69.51
HORVU1Hr1G075660.1	Barley	cytosol	81.15	68.28
HORVU1Hr1G075110.1	Barley	plastid	82.72	68.1
KRG88877	Soybean	cytosol	40.31	66.96
Zm00001d002889_P002	Maize	cytosol	87.43	66.01
KRG99305	Soybean	cytosol	68.06	64.68
KRH72403	Soybean	cytosol	45.55	64.44
Os01t0322300-00	Rice	cytosol	22.51	58.11
GSMUA_Achr5P26130_001	Banana	plastid	86.39	56.7
HORVU6Hr1G058900.2	Barley	cytosol	42.41	45.0
HORVU2Hr1G065020.1	Barley	cytosol	28.27	39.13
PGSC0003DMT400068875	Potato	cytosol	31.94	20.89
PGSC0003DMT400008028	Potato	extracellular	31.41	20.69

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649
UniProt:M1A595	HAMAP:MF_00209	PFAM:PF00719	EnsemblPlantsGene:PGSC0003DMG400005858	PGSC:PGSC0003DMG400005858	EnsemblPlants:PGSC0003DMT400015012
ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF10	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324
UniParc:UPI000294AC54	SEG:seg	:	:	:	:

Description

Soluble inorganic pyrophosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400005858]

Coordinates

chr8:-:5479024..5480100

Molecular Weight (calculated)

21905.3 Da

IEP (calculated)

5.137

GRAVY (calculated)

-0.406

Length

191 amino acids

Sequence
(BLAST)

001: MSDERSVPRL NERILSSLSR RSVAAHPWHD LEIGPEAPNV FNVVIEITKG SKVKYELDKK TGLIKVDRVL YSSVVYPQNY GFIPRTLCED NDPMDVLVLM
101: QEPVLPGCFL RARAIGLMPM IDQGEKDDKI IAVCADDPEY RHYTNINQLP PHRLAEIRRF FEEYKKNENK EVAVDEFLPP NTAAEAIQYS M

Best Arabidopsis Sequence Match ( AT4G01480.1 )
(BLAST)

001: MNGEEVKTSQ PQKKLQNPTP RLNERILSSL SKRSVAAHPW HDLEIGPGAP VIFNVVIEIS KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFVPRTLC
101: EDNDPIDVLV IMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCVDDP EYKHITNINE LPPHRLSEIR RFFEDYKKNE NKEVAVNDFL QPGPAIEAIQ
201: YSMDLYAEYI LHTLRR

Arabidopsis Description

PPA5PPa5 [Source:UniProtKB/TrEMBL;Acc:A0A178V127]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.