CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG88877
KRG97263
KRG98973
KRG99305
KRH06335
KRH13875
KRH39527
KRH43426
KRH45468
KRH45469
KRH47754
KRH68981
KRH72403
KRH74431
KRH75634

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	KRG88877	AT1G01050.1	21798944
AT4G01480.1	KRG97263	AT1G01050.1	21798944
AT4G01480.1	KRG98973	AT1G01050.1	21798944
AT4G01480.1	KRG99305	AT1G01050.1	21798944
AT4G01480.1	KRH06335	AT1G01050.1	21798944
AT4G01480.1	KRH47754	AT1G01050.1	21798944
AT4G01480.1	KRH68981	AT1G01050.1	21798944
AT4G01480.1	KRH72403	AT1G01050.1	21798944
AT4G01480.1	KRH13875	AT2G32840.1	21798944
AT4G01480.1	KRH43426	AT2G32840.1	21798944
AT4G01480.1	KRH39527	AT5G65683.1	21798944
AT4G01480.1	KRH45468	AT5G65683.1	21798944
AT4G01480.1	KRH45469	AT5G65683.1	21798944
AT4G01480.1	KRH74431	AT5G65683.1	21798944
AT4G01480.1	KRH75634	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32448	Canola	cytosol	89.15	91.75
Bra032616.1-P	Field mustard	cytosol	87.74	91.63
CDY55328	Canola	cytosol	88.68	91.26
KRG97263	Soybean	cytosol	90.57	91.0
CDY15206	Canola	cytosol	89.15	90.43
KRH68981	Soybean	cytosol	89.62	90.05
AT1G01050.1	Thale cress	cytosol	89.62	89.62
CDX90003	Canola	cytosol	89.62	89.62
Bra033292.1-P	Field mustard	cytosol	89.62	89.62
PGSC0003DMT400015012	Potato	cytosol	79.72	88.48
CDX97250	Canola	cytosol	88.68	87.85
CDY01933	Canola	cytosol	88.68	87.85
Bra037416.1-P	Field mustard	cytosol	88.68	87.85
Bra008551.1-P	Field mustard	cytosol	88.68	87.85
Solyc08g083370.2.1	Tomato	cytosol	84.91	87.8
CDY07141	Canola	cytosol	88.21	87.38
GSMUA_Achr3P22500_001	Banana	cytosol	87.26	87.26
EER94266	Sorghum	cytosol	83.49	86.76
GSMUA_Achr6P19560_001	Banana	cytosol	86.32	86.32
GSMUA_Achr7P03170_001	Banana	cytosol	85.85	85.85
KRH06335	Soybean	cytosol	90.09	85.65
AT2G46860.1	Thale cress	cytosol	87.26	85.65
Solyc08g013680.2.1	Tomato	cytosol	44.81	85.59
GSMUA_Achr8P07910_001	Banana	cytosol	85.38	85.38
PGSC0003DMT400012843	Potato	extracellular	84.91	85.31
Os10t0406100-01	Rice	cytosol	81.6	84.8
CDY27516	Canola	cytosol	86.32	84.72
Bra040479.1-P	Field mustard	cytosol	86.32	84.72
CDY48009	Canola	cytosol	86.32	84.72
Solyc12g055830.1.1	Tomato	extracellular	84.91	84.51
TraesCS2D01G587100.1	Wheat	cytosol	83.96	84.36
AT4G01480.1	Thale cress	cytosol	85.38	83.8
Os04t0687100-01	Rice	cytosol, plasma membrane	83.49	83.1
Zm00001d026680_P003	Maize	cytosol	83.49	82.71
VIT_02s0025g02980.t01	Wine grape	cytosol	83.49	82.71
TraesCS2A01G576400.1	Wheat	golgi	83.96	82.41
KXG27493	Sorghum	cytosol	83.02	82.24
PGSC0003DMT400031865	Potato	cytosol	82.08	82.08
Os05t0438500-01	Rice	cytosol	85.85	81.25
KRG98973	Soybean	cytosol	75.0	81.12
TraesCS2B01G611000.2	Wheat	cytosol	83.02	81.11
TraesCS1D01G273500.1	Wheat	cytosol	82.55	81.02
TraesCS1B01G283300.1	Wheat	cytosol	82.55	81.02
TraesCS1A01G273500.1	Wheat	cytosol	82.08	80.56
KRH19727	Soybean	cytosol	81.13	79.63
TraesCS1B01G355800.1	Wheat	cytosol	76.89	79.51
TraesCS1A01G342700.1	Wheat	cytosol	76.89	79.51
EES18298	Sorghum	cytosol	85.85	79.48
Zm00001d010171_P002	Maize	cytosol, extracellular	83.96	79.46
TraesCS1D01G344800.2	Wheat	cytosol	76.42	79.02
KRH28709	Soybean	nucleus	79.25	78.87
Os01t0866500-01	Rice	cytosol	78.77	78.77
KRH32318	Soybean	cytosol	80.19	78.7
KRH76757	Soybean	cytosol	78.77	78.4
OQU87920	Sorghum	cytosol	59.91	76.97
TraesCS3B01G077900.2	Wheat	plastid	83.96	74.48
HORVU1Hr1G075660.1	Barley	cytosol	79.25	74.01
KRG95822	Soybean	cytosol	78.77	72.93
KRH67552	Soybean	cytosol	78.77	72.29
KRG88877	Soybean	cytosol	39.15	72.17
HORVU1Hr1G075110.1	Barley	plastid	77.83	71.12
KRH72403	Soybean	cytosol	45.28	71.11
Zm00001d002889_P002	Maize	cytosol	82.55	69.17
KRG99305	Soybean	cytosol	65.09	68.66
GSMUA_Achr5P26130_001	Banana	plastid	84.91	61.86
Os01t0322300-00	Rice	cytosol	20.28	58.11
HORVU6Hr1G058900.2	Barley	cytosol	39.62	46.67
HORVU2Hr1G065020.1	Barley	cytosol	25.94	39.86
KRH21683	Soybean	nucleus	29.72	21.88
KRH10663	Soybean	nucleus	29.72	21.88

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	EMBL:ACUP02004162	EnsemblPlantsGene:GLYMA_07G048300	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	UniProt:I1KHM5	InterPro:IPR036649	EnsemblPlants:KRH47754	ProteinID:KRH47754	ProteinID:KRH47754.1
HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF10	MetaCyc:PWY-7805
MetaCyc:PWY-7807	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	UniParc:UPI000211E261	:

Description

hypothetical protein

Coordinates

chr7:-:4086892..4090342

Molecular Weight (calculated)

24474.4 Da

IEP (calculated)

5.181

GRAVY (calculated)

-0.420

Length

212 amino acids

Sequence
(BLAST)

001: MSDENNEEPC ENRPVPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPMIFN CVVEITKGSK VKYELDKKTG LIKVDRVLYS SVVYPHNYGF IPRTLCEDND
101: PIDVLVLMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCADDPEYKH YTDFKELPPH RLMEIRRFFE DYKKNENKEV AVNDFLPAST AVESIQYSMD
201: LYAEYILHTL RR

Best Arabidopsis Sequence Match ( AT1G01050.2 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.