CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG88877
KRG97263
KRG98973
KRG99305
KRH06335
KRH13875
KRH39527
KRH43426
KRH45468
KRH45469
KRH47754
KRH68981
KRH72403
KRH74431
KRH75634

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	KRG88877	AT1G01050.1	21798944
AT4G01480.1	KRG97263	AT1G01050.1	21798944
AT4G01480.1	KRG98973	AT1G01050.1	21798944
AT4G01480.1	KRG99305	AT1G01050.1	21798944
AT4G01480.1	KRH06335	AT1G01050.1	21798944
AT4G01480.1	KRH47754	AT1G01050.1	21798944
AT4G01480.1	KRH68981	AT1G01050.1	21798944
AT4G01480.1	KRH72403	AT1G01050.1	21798944
AT4G01480.1	KRH13875	AT2G32840.1	21798944
AT4G01480.1	KRH43426	AT2G32840.1	21798944
AT4G01480.1	KRH39527	AT5G65683.1	21798944
AT4G01480.1	KRH45468	AT5G65683.1	21798944
AT4G01480.1	KRH45469	AT5G65683.1	21798944
AT4G01480.1	KRH74431	AT5G65683.1	21798944
AT4G01480.1	KRH75634	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88877	Soybean	cytosol	71.85	84.35
KRG97263	Soybean	cytosol	76.3	48.82
KRH68981	Soybean	cytosol	74.81	47.87
PGSC0003DMT400015012	Potato	cytosol	64.44	45.55
KRH47754	Soybean	cytosol	71.11	45.28
KRG98973	Soybean	cytosol	64.44	44.39
CDY55328	Canola	cytosol	66.67	43.69
CDY32448	Canola	cytosol	66.67	43.69
Bra032616.1-P	Field mustard	cytosol	65.19	43.35
GSMUA_Achr6P19560_001	Banana	cytosol	67.41	42.92
GSMUA_Achr3P22500_001	Banana	cytosol	67.41	42.92
KRH06335	Soybean	cytosol	70.37	42.6
CDY15206	Canola	cytosol	65.93	42.58
AT1G01050.1	Thale cress	cytosol	66.67	42.45
GSMUA_Achr8P07910_001	Banana	cytosol	66.67	42.45
CDX90003	Canola	cytosol	66.67	42.45
Bra033292.1-P	Field mustard	cytosol	66.67	42.45
Os04t0687100-01	Rice	cytosol, plasma membrane	66.67	42.25
GSMUA_Achr7P03170_001	Banana	cytosol	65.93	41.98
Solyc08g083370.2.1	Tomato	cytosol	63.7	41.95
KRG99305	Soybean	cytosol	61.48	41.29
TraesCS2D01G587100.1	Wheat	cytosol	64.44	41.23
TraesCS1B01G283300.1	Wheat	cytosol	65.93	41.2
Os10t0406100-01	Rice	cytosol	62.22	41.18
EER94266	Sorghum	cytosol	62.22	41.18
KXG27493	Sorghum	cytosol	65.19	41.12
VIT_02s0025g02980.t01	Wine grape	cytosol	65.19	41.12
Zm00001d026680_P003	Maize	cytosol	65.19	41.12
TraesCS1A01G273500.1	Wheat	cytosol	65.19	40.74
TraesCS1D01G273500.1	Wheat	cytosol	65.19	40.74
AT2G46860.1	Thale cress	cytosol	65.19	40.74
Bra037416.1-P	Field mustard	cytosol	64.44	40.65
PGSC0003DMT400012843	Potato	extracellular	62.96	40.28
CDY48009	Canola	cytosol	64.44	40.28
CDY27516	Canola	cytosol	64.44	40.28
TraesCS2A01G576400.1	Wheat	golgi	64.44	40.28
Bra040479.1-P	Field mustard	cytosol	64.44	40.28
CDY01933	Canola	cytosol	63.7	40.19
CDY07141	Canola	cytosol	63.7	40.19
CDX97250	Canola	cytosol	63.7	40.19
Bra008551.1-P	Field mustard	cytosol	63.7	40.19
PGSC0003DMT400031865	Potato	cytosol	62.96	40.09
TraesCS2B01G611000.2	Wheat	cytosol	64.44	40.09
Solyc12g055830.1.1	Tomato	extracellular	62.96	39.91
Zm00001d010171_P002	Maize	cytosol, extracellular	65.93	39.73
EES18298	Sorghum	cytosol	66.67	39.3
Os01t0866500-01	Rice	cytosol	61.48	39.15
HORVU2Hr1G065020.1	Barley	cytosol	40.0	39.13
AT4G01480.1	Thale cress	cytosol	62.22	38.89
Os05t0438500-01	Rice	cytosol	64.44	38.84
KRH19727	Soybean	cytosol	61.48	38.43
TraesCS1A01G342700.1	Wheat	cytosol	57.78	38.05
TraesCS1B01G355800.1	Wheat	cytosol	57.78	38.05
KRH32318	Soybean	cytosol	60.74	37.96
TraesCS1D01G344800.2	Wheat	cytosol	57.04	37.56
KRH76757	Soybean	cytosol	59.26	37.56
KRH28709	Soybean	nucleus	59.26	37.56
HORVU1Hr1G075110.1	Barley	plastid	63.7	37.07
OQU87920	Sorghum	cytosol	45.19	36.97
TraesCS3B01G077900.2	Wheat	plastid	64.44	36.4
HORVU1Hr1G075660.1	Barley	cytosol	60.74	36.12
KRG95822	Soybean	cytosol	60.0	35.37
KRH67552	Soybean	cytosol	60.0	35.06
Zm00001d002889_P002	Maize	cytosol	64.44	34.39
HORVU6Hr1G058900.2	Barley	cytosol	42.22	31.67
GSMUA_Achr5P26130_001	Banana	plastid	65.93	30.58
KRH21683	Soybean	nucleus	23.7	11.11
KRH10663	Soybean	nucleus	23.7	11.11
Os01t0322300-00	Rice	cytosol	2.22	4.05
Solyc08g013680.2.1	Tomato	cytosol	2.22	2.7

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	EMBL:ACUP02001206	EnsemblPlantsGene:GLYMA_02G209900	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	InterPro:IPR036649	UniProt:K7K9V4	EnsemblPlants:KRH72403	ProteinID:KRH72403	ProteinID:KRH72403.1
PFAM:PF00719	PANTHER:PTHR10286	PANTHER:PTHR10286:SF10	MetaCyc:PWY-7805	MetaCyc:PWY-7807	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	UniParc:UPI000294831E	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:39513816..39515113

Molecular Weight (calculated)

15620.9 Da

IEP (calculated)

9.137

GRAVY (calculated)

-0.483

Length

135 amino acids

Sequence
(BLAST)

001: MFLIQEALLW RGKQWSLEII MSDNGEEAGE NRLVPRLNER ILSSLSRRSV AAHPWHDLEI GPEAPQIFNC VVEITKGSKV KYELDKKTGL IKVDRVLYSS
101: VVYPHNYGFI PRTLCEDNDP IDKIHSKTKR MSTRR

Best Arabidopsis Sequence Match ( AT1G01050.1 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.