Factsheet for TraesCS3B01G077900.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G273500.1
TraesCS1A01G342700.1
TraesCS1B01G283300.1
TraesCS1B01G355800.1
TraesCS1D01G273500.1
TraesCS1D01G344800.2
TraesCS2A01G045100.1
TraesCS2A01G576400.1
TraesCS2B01G057300.1
TraesCS2B01G611000.2
TraesCS2D01G043700.1
TraesCS2D01G587100.1
TraesCS3B01G077900.2
TraesCS4A01G076800.1
TraesCS4B01G232900.1
TraesCS4D01G234100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	TraesCS1A01G273500.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS1A01G342700.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS1B01G283300.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS1B01G355800.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS1D01G273500.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS1D01G344800.2	AT1G01050.1	21798944
AT4G01480.1	TraesCS2A01G576400.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS2B01G611000.2	AT1G01050.1	21798944
AT4G01480.1	TraesCS2D01G587100.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS3B01G077900.2	AT1G01050.1	21798944
AT4G01480.1	TraesCS4A01G076800.1	AT2G32840.1	21798944
AT4G01480.1	TraesCS4B01G232900.1	AT2G32840.1	21798944
AT4G01480.1	TraesCS4D01G234100.1	AT2G32840.1	21798944
AT4G01480.1	TraesCS2A01G045100.1	AT5G65683.1	21798944
AT4G01480.1	TraesCS2B01G057300.1	AT5G65683.1	21798944
AT4G01480.1	TraesCS2D01G043700.1	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G611000.2	Wheat	cytosol	86.19	94.93
Os04t0687100-01	Rice	cytosol, plasma membrane	84.1	94.37
KXG27493	Sorghum	cytosol	83.68	93.46
Zm00001d026680_P003	Maize	cytosol	83.68	93.46
GSMUA_Achr7P03170_001	Banana	cytosol	78.66	88.68
GSMUA_Achr3P22500_001	Banana	cytosol	78.24	88.21
PGSC0003DMT400015012	Potato	cytosol	69.87	87.43
GSMUA_Achr8P07910_001	Banana	cytosol	77.41	87.26
GSMUA_Achr6P19560_001	Banana	cytosol	77.41	87.26
Solyc08g083370.2.1	Tomato	cytosol	73.64	85.85
Bra032616.1-P	Field mustard	cytosol	72.8	85.71
KRH47754	Soybean	cytosol	74.48	83.96
AT1G01050.1	Thale cress	cytosol	74.06	83.49
Solyc12g055830.1.1	Tomato	extracellular	74.06	83.1
Bra033292.1-P	Field mustard	cytosol	73.64	83.02
PGSC0003DMT400012843	Potato	extracellular	73.22	82.94
Solyc08g013680.2.1	Tomato	cytosol	38.49	82.88
AT2G46860.1	Thale cress	cytosol	74.06	81.94
Bra037416.1-P	Field mustard	cytosol	73.22	81.78
Bra040479.1-P	Field mustard	cytosol	73.64	81.48
Bra008551.1-P	Field mustard	cytosol	72.8	81.31
KRH68981	Soybean	cytosol	71.55	81.04
KRG97263	Soybean	cytosol	71.55	81.04
TraesCS1B01G283300.1	Wheat	cytosol	73.22	81.02
TraesCS1B01G355800.1	Wheat	cytosol	69.46	80.98
TraesCS6B01G299800.1	Wheat	cytosol	71.55	79.91
PGSC0003DMT400031865	Potato	cytosol	70.71	79.72
Zm00001d002889_P002	Maize	cytosol	83.26	78.66
VIT_02s0025g02980.t01	Wine grape	cytosol	70.29	78.5
AT4G01480.1	Thale cress	cytosol	69.87	77.31
CDY69447	Canola	cytosol	25.52	77.22
KRG98973	Soybean	cytosol	61.51	75.0
KRH06335	Soybean	cytosol	69.46	74.44
TraesCS1B01G049200.1	Wheat	cytosol	66.53	73.27
TraesCS3B01G611800.1	Wheat	cytosol	68.62	71.93
TraesCS3B01G611600.1	Wheat	golgi	68.2	69.96
Os01t0322300-00	Rice	cytosol	21.34	68.92
KRG88877	Soybean	cytosol	32.64	67.83
GSMUA_Achr5P26130_001	Banana	plastid	79.08	64.95
KRH72403	Soybean	cytosol	36.4	64.44
KRG99305	Soybean	cytosol	53.56	63.68
TraesCS6B01G360300.1	Wheat	plastid	25.1	20.91

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649
HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF22	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	EnsemblPlantsGene:TraesCS3B01G077900	EnsemblPlants:TraesCS3B01G077900.2	TIGR:cd00412	SEG:seg

Description

No Description!

Coordinates

chr3B:-:48886177..48889314

Molecular Weight (calculated)

27177.8 Da

IEP (calculated)

7.045

GRAVY (calculated)

-0.384

Length

239 amino acids

Sequence
(BLAST)

001: MQCRGVNLLF LPPPPPPLVV SRGRLQPQRS RMSEEDSTSR PAPKLNERIL SSLSRRAVAA HPWHDLEIGP GAPAVFNVVV EITKGSKVKY ELDKKTGLIK
101: VDRVLYSSVV YPHNYGFIPR TLCEDNDPMD VLVLMQEPVI PGSFLRARAI GLMPMIDQGE KDDKIIAVCA DDPEYRHYND ISELSPHRLQ EIKRFFEDYK
201: KNENKEVAVD AFLPATTARE AIQYSMDLYA QYILQSLRQ

Best Arabidopsis Sequence Match ( AT2G46860.1 )
(BLAST)

001: MSEEAYEETQ ESSQSPRPVP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR

Arabidopsis Description

PPA3PPa3 [Source:UniProtKB/TrEMBL;Acc:A0A178VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.