Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G076800.1 | Wheat | plastid | 93.9 | 94.15 |
| TraesCS4B01G232900.1 | Wheat | plastid | 93.63 | 93.14 |
| HORVU4Hr1G064990.1 | Barley | plastid | 82.76 | 79.8 |
| Os03t0234600-00 | Rice | plastid | 45.62 | 64.91 |
| EER92590 | Sorghum | plastid | 48.28 | 58.9 |
| Zm00001d047985_P002 | Maize | plastid | 48.28 | 49.86 |
| GSMUA_Achr7P11350_001 | Banana | endoplasmic reticulum, extracellular | 20.16 | 43.93 |
| GSMUA_Achr6P06320_001 | Banana | nucleus | 11.14 | 39.25 |
| VIT_13s0156g00270.t01 | Wine grape | cytosol | 11.14 | 33.07 |
| KRH43426 | Soybean | cytosol | 22.81 | 31.73 |
| KRH13875 | Soybean | cytosol, nucleus, plastid | 24.14 | 31.6 |
| CDY12159 | Canola | nucleus, plastid | 22.55 | 28.62 |
| Bra005553.1-P | Field mustard | nucleus, plastid | 22.28 | 28.09 |
| CDY52552 | Canola | nucleus, plastid | 20.95 | 26.87 |
| CDY18271 | Canola | plastid | 19.63 | 24.92 |
| Solyc01g073920.2.1 | Tomato | cytosol, plastid | 22.02 | 24.27 |
| CDX89775 | Canola | plastid | 21.75 | 24.26 |
| Bra015366.1-P | Field mustard | nucleus, plastid | 21.75 | 24.26 |
| AT2G32840.1 | Thale cress | nucleus, plastid | 20.16 | 22.55 |
| AT1G04930.2 | Thale cress | nucleus, plastid | 21.49 | 22.38 |
| PGSC0003DMT400016192 | Potato | nucleus, plastid | 11.94 | 15.73 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G234100.1 | EnsemblPlantsGene:TraesCS4D01G234100 | GO:GO:0005575 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0017053 | InterPro:LIN37 | ncoils:Coil | PANTHER:PTHR37173 | PFAM:PF15306 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:394371631..394377459
Molecular Weight (calculated)
40063.6 Da
IEP (calculated)
10.469
GRAVY (calculated)
-0.468
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPPPQRPP TSTTAPPPTA TPPPPPATAP QPLPRAFLAT STAPQRAANS TPPPPPLFTG RPLNPNPSHA SPAHGILYPV ATSSSIPAAA AAAAAVAANH
101: RRAPPIGVAY PRAHAVAVPV TAPSQQPQAP AQPRSYAAVP RAVVAGVTPR PEHPPRGVPI APHPQLKVNA VPAVTPSLAV TPSPAVTPSL VVTPSPAVTP
201: SPAFTPFPQE HVTTKEREST KENASTVVIN DRKVNVLDSE SGSLYALCRS WLRNGVPHEI QPSFVGNVAP LLPRPLPASV VDSRMSEKDH DVENQVSEEE
301: QRYAQERNAL CTRDAMDRAL TNNDTSEYTA ADLLREHVTR AKNIRAKLRK ERQVRIERYK QRLALLLPPP PPPPSEP
101: RRAPPIGVAY PRAHAVAVPV TAPSQQPQAP AQPRSYAAVP RAVVAGVTPR PEHPPRGVPI APHPQLKVNA VPAVTPSLAV TPSPAVTPSL VVTPSPAVTP
201: SPAFTPFPQE HVTTKEREST KENASTVVIN DRKVNVLDSE SGSLYALCRS WLRNGVPHEI QPSFVGNVAP LLPRPLPASV VDSRMSEKDH DVENQVSEEE
301: QRYAQERNAL CTRDAMDRAL TNNDTSEYTA ADLLREHVTR AKNIRAKLRK ERQVRIERYK QRLALLLPPP PPPPSEP
001: MSTPDPNPNP NPNPSVSVAV STPIVTASES PVTQPNTVIT PSSQPQPQTP ASSYRAIAPL HRHHPHQNIY TNPLPIRRSN SVTNSPHQPP HPDPSSLIYP
101: FGSSGRGFPT RPVRQNSNSV ADPVGSPSPG GYTPRGPVYG YHHGQFVSNL DPMNQFMRAA HPQNQQSPQL GSGHMKGVPH FLQPRATPSP TSILDNSGHK
201: KARSRDDALV LVRKRKVRIT EGASLYSLCR SWLRNGAHEG IKPQRIDMMT CLPKPLPVDK TETSLPKDLV EEAICEEDKE DEESVKHLSE SDLLKRHIDR
301: AKKVRARLRE ERLKRIARYK ARLALLLPPF GEQCRNE
101: FGSSGRGFPT RPVRQNSNSV ADPVGSPSPG GYTPRGPVYG YHHGQFVSNL DPMNQFMRAA HPQNQQSPQL GSGHMKGVPH FLQPRATPSP TSILDNSGHK
201: KARSRDDALV LVRKRKVRIT EGASLYSLCR SWLRNGAHEG IKPQRIDMMT CLPKPLPVDK TETSLPKDLV EEAICEEDKE DEESVKHLSE SDLLKRHIDR
301: AKKVRARLRE ERLKRIARYK ARLALLLPPF GEQCRNE
Arabidopsis Description
Proline-rich family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYK6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.