Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G276600.1 | Wheat | nucleus | 83.96 | 83.45 |
| TraesCS7D01G371500.1 | Wheat | nucleus | 83.6 | 83.19 |
| HORVU0Hr1G021800.1 | Barley | nucleus | 79.47 | 80.25 |
| Os06t0524300-01 | Rice | nucleus | 67.56 | 68.56 |
| EER88427 | Sorghum | nucleus | 59.42 | 61.43 |
| Zm00001d046072_P001 | Maize | cytosol | 56.74 | 57.87 |
| TraesCS7A01G336000.1 | Wheat | nucleus | 56.74 | 54.75 |
| Bra037384.1-P | Field mustard | nucleus | 13.0 | 46.72 |
| KRG99688 | Soybean | cytosol | 3.52 | 42.65 |
| GSMUA_Achr10P... | Banana | nucleus | 38.15 | 40.05 |
| GSMUA_Achr7P14150_001 | Banana | nucleus | 36.57 | 39.71 |
| GSMUA_Achr10P... | Banana | nucleus | 35.48 | 38.88 |
| GSMUA_Achr10P... | Banana | cytosol | 36.09 | 38.27 |
| CDX79176 | Canola | cytosol | 4.98 | 36.28 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 32.69 | 31.68 |
| CDY42041 | Canola | cytosol | 24.67 | 31.42 |
| CDX80013 | Canola | nucleus | 24.67 | 30.53 |
| CDX71720 | Canola | cytosol | 27.34 | 30.41 |
| Bra004541.1-P | Field mustard | nucleus | 24.79 | 30.4 |
| CDY11374 | Canola | cytosol | 27.34 | 30.36 |
| Bra007625.1-P | Field mustard | cytosol | 26.73 | 29.69 |
| CDY48504 | Canola | nucleus | 19.93 | 29.13 |
| AT3G61670.1 | Thale cress | nucleus | 27.82 | 28.99 |
| CDY11373 | Canola | cytosol | 25.76 | 28.92 |
| AT2G46380.1 | Thale cress | nucleus | 26.49 | 28.39 |
| Bra033264.1-P | Field mustard | nucleus | 19.93 | 28.23 |
| CDY15177 | Canola | nucleus | 18.95 | 28.01 |
| CDX90032 | Canola | nucleus | 18.95 | 27.86 |
| KRH06502 | Soybean | nucleus | 30.01 | 27.69 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 26.25 | 27.66 |
| KRG97141 | Soybean | nucleus | 30.13 | 27.22 |
| KRH47938 | Soybean | nucleus | 29.28 | 26.96 |
| CDX91876 | Canola | nucleus | 19.08 | 26.88 |
| KRH68892 | Soybean | nucleus | 29.53 | 26.88 |
| Solyc08g082040.2.1 | Tomato | nucleus | 30.13 | 26.24 |
| CDY67475 | Canola | nucleus | 18.83 | 26.23 |
| PGSC0003DMT400032053 | Potato | nucleus | 30.13 | 26.22 |
| Bra000943.1-P | Field mustard | nucleus | 18.83 | 25.83 |
| CDY07174 | Canola | nucleus | 19.81 | 25.63 |
| AT1G01440.1 | Thale cress | nucleus | 20.17 | 25.0 |
| PGSC0003DMT400000290 | Potato | nucleus | 30.26 | 24.8 |
| Solyc01g095590.2.1 | Tomato | nucleus | 28.8 | 24.51 |
| AT4G01090.1 | Thale cress | nucleus | 20.41 | 23.53 |
| TraesCS1A01G425200.2 | Wheat | nucleus | 21.87 | 22.87 |
| TraesCS3A01G224200.2 | Wheat | nucleus | 20.78 | 20.5 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G351500.1 | EnsemblPlantsGene:TraesCS7A01G351500 | InterPro:Zinc_ribbon_12 | ncoils:Coil | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF7 |
| PFAM:PF11331 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:514822672..514828794
Molecular Weight (calculated)
90802.0 Da
IEP (calculated)
7.495
GRAVY (calculated)
-0.713
Length
823 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDEAGAAA AAAARIRVVR CPKCDKFLPE LPAYSVYVCG GCGATLQAKR KNSAQALDTS DNGNMKYLEV LETVPETSEA MAGASIDHKS VPNRMPPLHS
101: RSVYSRDNSR ITRETSASSV KANIRDDVRE AKYMRFRNVE NGETAHPVRA RGVSDISPRS QIDSVPPNAV RGEGPVDHQL KSRNTYSNRE RVNDTDMDGP
201: SRVRDLEKDR AELLRMLDEL RDQVQQSCEV NGPDTSATVN RAADASSSYN IHERASQFRH DPSQLHRKGP HHSSSMNMRN PSVPHVYGPL PTQQSLHGYV
301: EPIAHARTSS YPAGPYPWRN FDNYFFGQHD PDPLLSCHHE GFYHQAACSC SHCYHREFLP VQGTPLGFSD QRAPYLVNSY GAYPVDGPLL GQQRYNSRGA
401: NPSLQQHNLR ANVSKKPAQT CEPIAGGAPF TICYNCYEVL QLPNKRSLLG KEYKLRCGSC SHTIVIKLDG TRLDVSELAP SAHLSPAPQN GIGDNMADNL
501: RATADDRLLP TYAFSVASHQ SQEKDKHSNS SETGSKHTPL GTNSEDSPQS RDLPAEDNVM SRTPSLPRRD HCGFSPSEGS GIGSRSTRSE HEKVVLLTET
601: CKQNSIKDVC VANEMHSSDN EFDDPDYTED VLNVPQDSGH TRTTKVGDSF FTNLIKKSFK MNNGTRNGRA RVFVNGFPIP DRAVRKAEKL AGPIYPGDYW
701: YDYRAGFWGV VGQPCLGMIP PYIPEFNYPM PKNCGGGNTG IYINGRELHQ KDLDLLVSRG LSDSPERSYI VENSGKVTDE ASGEELYGLG KLAPTVEKLR
801: RGFGMRVPKV IVTGQHATII THG
101: RSVYSRDNSR ITRETSASSV KANIRDDVRE AKYMRFRNVE NGETAHPVRA RGVSDISPRS QIDSVPPNAV RGEGPVDHQL KSRNTYSNRE RVNDTDMDGP
201: SRVRDLEKDR AELLRMLDEL RDQVQQSCEV NGPDTSATVN RAADASSSYN IHERASQFRH DPSQLHRKGP HHSSSMNMRN PSVPHVYGPL PTQQSLHGYV
301: EPIAHARTSS YPAGPYPWRN FDNYFFGQHD PDPLLSCHHE GFYHQAACSC SHCYHREFLP VQGTPLGFSD QRAPYLVNSY GAYPVDGPLL GQQRYNSRGA
401: NPSLQQHNLR ANVSKKPAQT CEPIAGGAPF TICYNCYEVL QLPNKRSLLG KEYKLRCGSC SHTIVIKLDG TRLDVSELAP SAHLSPAPQN GIGDNMADNL
501: RATADDRLLP TYAFSVASHQ SQEKDKHSNS SETGSKHTPL GTNSEDSPQS RDLPAEDNVM SRTPSLPRRD HCGFSPSEGS GIGSRSTRSE HEKVVLLTET
601: CKQNSIKDVC VANEMHSSDN EFDDPDYTED VLNVPQDSGH TRTTKVGDSF FTNLIKKSFK MNNGTRNGRA RVFVNGFPIP DRAVRKAEKL AGPIYPGDYW
701: YDYRAGFWGV VGQPCLGMIP PYIPEFNYPM PKNCGGGNTG IYINGRELHQ KDLDLLVSRG LSDSPERSYI VENSGKVTDE ASGEELYGLG KLAPTVEKLR
801: RGFGMRVPKV IVTGQHATII THG
001: MADSTKVRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK TKEREADSVS VKSVEDTAKP VSASSPEKAI LDSSETSSDS DVPSLRHHHN VVPVDVESDP
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q9M371]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.