Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G253700.2 | Wheat | nucleus | 91.34 | 91.46 |
| TraesCS3A01G224200.2 | Wheat | nucleus | 94.98 | 90.77 |
| HORVU3Hr1G055550.3 | Barley | nucleus | 82.81 | 83.23 |
| Os01t0621300-01 | Rice | nucleus | 71.14 | 70.26 |
| EES03295 | Sorghum | nucleus | 64.12 | 64.04 |
| Zm00001d011373_P002 | Maize | nucleus | 63.86 | 62.76 |
| Zm00001d044191_P004 | Maize | nucleus | 62.36 | 62.59 |
| TraesCS1D01G434200.2 | Wheat | nucleus | 44.92 | 45.78 |
| Bra037384.1-P | Field mustard | nucleus | 12.67 | 44.1 |
| CDX79176 | Canola | cytosol | 5.4 | 38.05 |
| CDY48504 | Canola | nucleus | 19.95 | 28.24 |
| CDY15177 | Canola | nucleus | 19.45 | 27.83 |
| CDX91876 | Canola | nucleus | 20.2 | 27.57 |
| CDY67475 | Canola | nucleus | 20.2 | 27.24 |
| Bra000943.1-P | Field mustard | nucleus | 20.33 | 27.0 |
| CDX90032 | Canola | nucleus | 18.95 | 26.96 |
| Bra033264.1-P | Field mustard | nucleus | 19.32 | 26.51 |
| CDY07174 | Canola | nucleus | 20.95 | 26.26 |
| CDX80013 | Canola | nucleus | 20.83 | 24.96 |
| CDY42041 | Canola | cytosol | 20.08 | 24.77 |
| Bra004541.1-P | Field mustard | nucleus | 20.58 | 24.44 |
| GSMUA_Achr3P25070_001 | Banana | vacuole | 20.95 | 24.13 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 25.22 | 23.67 |
| AT1G01440.1 | Thale cress | nucleus | 19.7 | 23.64 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 23.09 | 23.56 |
| CDX71720 | Canola | cytosol | 21.83 | 23.51 |
| Bra007625.1-P | Field mustard | cytosol | 21.83 | 23.48 |
| CDY11374 | Canola | cytosol | 21.83 | 23.48 |
| AT4G01090.1 | Thale cress | nucleus | 20.7 | 23.11 |
| AT3G61670.1 | Thale cress | nucleus | 22.46 | 22.66 |
| AT2G46380.1 | Thale cress | nucleus | 21.58 | 22.4 |
| CDY11373 | Canola | cytosol | 20.33 | 22.1 |
| KRH68892 | Soybean | nucleus | 23.59 | 20.8 |
| TraesCS7D01G343700.1 | Wheat | cytosol | 22.08 | 20.73 |
| TraesCS7D01G371500.1 | Wheat | nucleus | 21.46 | 20.68 |
| KRG97141 | Soybean | nucleus | 23.46 | 20.53 |
| KRH47938 | Soybean | nucleus | 22.58 | 20.13 |
| KRH06502 | Soybean | nucleus | 22.46 | 20.07 |
| PGSC0003DMT400032053 | Potato | nucleus | 22.08 | 18.6 |
| Solyc08g082040.2.1 | Tomato | nucleus | 21.96 | 18.52 |
| Solyc01g095590.2.1 | Tomato | nucleus | 22.46 | 18.51 |
| PGSC0003DMT400000290 | Potato | nucleus | 22.08 | 17.53 |
| KRG99688 | Soybean | cytosol | 1.0 | 11.76 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G229400.1 | EnsemblPlantsGene:TraesCS3D01G229400 | InterPro:Zinc_ribbon_12 | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF6 | PFAM:PF11331 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:312887571..312894449
Molecular Weight (calculated)
89270.3 Da
IEP (calculated)
6.336
GRAVY (calculated)
-0.958
Length
797 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDLKEMKYR RRIGLQERAQ CSDQRAVDWG VLKQDPVELL RKLDELRDQI TRSCQVAEQP REHRRVGRRP PSLLPDLPEP VPLPGYHRPR YGARYGHGLP
101: LSPCEPQHSD HGERYARQSS GRYRQYPGRQ WDNGGIGHGN YHQYACASPH YLHGQRPAPQ EEHIPMARYF AGQHECYRFE RSPSISSDYD QRSVASSLYS
201: HRSVSKKRAE YFRKKAEHLC RPMHGAAPFV VCSSCYNLLQ LPMEKCMGWK QNRLQCGSCS EIISVKRMKG KAIPYTSSPS FSLSKTEQSS HDRMRRDFEH
301: QHHDDVTSAF YNLNEHSSMQ INIDFGDDNS VSSTISHERT DRECGSNRSI QSKADGISLS PGRSGDIESP KDILCERDAD CQEEHSVDGP VSPCSPILED
401: KLVDPLCSQE KHNSSEDLGM DNGSDLNCKG EYNVNDDESV SMGSEQKVNE AELVEESMCR KHDQKNKEDH CSSLEDVSKM HGQNSTKVDP DSLENGNEKH
501: EWTSKTDVTS SPESEGKCKK YDHNSKEDET SGLKVENTSN EFDKKNTADS SSALEHANTA IEFEGTSTSE RYEENLMEQD NGKLHEPCAE DANALTESGS
601: SVNGRTNSGF SHGSSEAGLD EDQSSTGKSG DSSFFAGFLK KGFKDLSLFN QSMDSVKVSI NGHPISERAL KKAEKKAGPV EPGSYWYDCR AGFWGIMGRE
701: CIGIIPPYIR EFNYPMPRNC AGGDTDVIVN GRELHQRDLD LLVGRGLPRI SGKSYSIEIS GNITDDAGNK LRSLGKLAPT IEKLKRGFGM HVPEGFR
101: LSPCEPQHSD HGERYARQSS GRYRQYPGRQ WDNGGIGHGN YHQYACASPH YLHGQRPAPQ EEHIPMARYF AGQHECYRFE RSPSISSDYD QRSVASSLYS
201: HRSVSKKRAE YFRKKAEHLC RPMHGAAPFV VCSSCYNLLQ LPMEKCMGWK QNRLQCGSCS EIISVKRMKG KAIPYTSSPS FSLSKTEQSS HDRMRRDFEH
301: QHHDDVTSAF YNLNEHSSMQ INIDFGDDNS VSSTISHERT DRECGSNRSI QSKADGISLS PGRSGDIESP KDILCERDAD CQEEHSVDGP VSPCSPILED
401: KLVDPLCSQE KHNSSEDLGM DNGSDLNCKG EYNVNDDESV SMGSEQKVNE AELVEESMCR KHDQKNKEDH CSSLEDVSKM HGQNSTKVDP DSLENGNEKH
501: EWTSKTDVTS SPESEGKCKK YDHNSKEDET SGLKVENTSN EFDKKNTADS SSALEHANTA IEFEGTSTSE RYEENLMEQD NGKLHEPCAE DANALTESGS
601: SVNGRTNSGF SHGSSEAGLD EDQSSTGKSG DSSFFAGFLK KGFKDLSLFN QSMDSVKVSI NGHPISERAL KKAEKKAGPV EPGSYWYDCR AGFWGIMGRE
701: CIGIIPPYIR EFNYPMPRNC AGGDTDVIVN GRELHQRDLD LLVGRGLPRI SGKSYSIEIS GNITDDAGNK LRSLGKLAPT IEKLKRGFGM HVPEGFR
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.