Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G253700.2 | Wheat | nucleus | 87.77 | 87.44 |
| TraesCS3D01G229400.1 | Wheat | nucleus | 83.23 | 82.81 |
| TraesCS3A01G224200.2 | Wheat | nucleus | 80.83 | 76.86 |
| Os01t0621300-01 | Rice | nucleus | 73.01 | 71.75 |
| EES03295 | Sorghum | nucleus | 66.08 | 65.66 |
| Zm00001d044191_P004 | Maize | nucleus | 63.81 | 63.73 |
| Zm00001d011373_P002 | Maize | nucleus | 64.94 | 63.5 |
| Bra037384.1-P | Field mustard | nucleus | 12.48 | 43.23 |
| HORVU1Hr1G092980.14 | Barley | plastid | 45.4 | 41.05 |
| CDX79176 | Canola | cytosol | 5.42 | 38.05 |
| CDY48504 | Canola | nucleus | 19.67 | 27.71 |
| CDY15177 | Canola | nucleus | 19.29 | 27.47 |
| CDX90032 | Canola | nucleus | 19.17 | 27.14 |
| Bra033264.1-P | Field mustard | nucleus | 19.42 | 26.51 |
| CDX91876 | Canola | nucleus | 19.42 | 26.37 |
| CDY67475 | Canola | nucleus | 19.42 | 26.06 |
| Bra000943.1-P | Field mustard | nucleus | 19.29 | 25.5 |
| CDY07174 | Canola | nucleus | 20.43 | 25.47 |
| CDX80013 | Canola | nucleus | 20.43 | 24.36 |
| GSMUA_Achr3P25070_001 | Banana | vacuole | 21.19 | 24.28 |
| CDY42041 | Canola | cytosol | 19.67 | 24.15 |
| CDX71720 | Canola | cytosol | 22.19 | 23.78 |
| Bra004541.1-P | Field mustard | nucleus | 20.05 | 23.7 |
| AT1G01440.1 | Thale cress | nucleus | 19.8 | 23.64 |
| CDY11374 | Canola | cytosol | 22.07 | 23.62 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 25.09 | 23.44 |
| Bra007625.1-P | Field mustard | cytosol | 21.56 | 23.08 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 22.7 | 23.05 |
| AT3G61670.1 | Thale cress | nucleus | 22.82 | 22.91 |
| CDY11373 | Canola | cytosol | 20.81 | 22.51 |
| AT2G46380.1 | Thale cress | nucleus | 21.44 | 22.14 |
| AT4G01090.1 | Thale cress | nucleus | 19.92 | 22.13 |
| KRH68892 | Soybean | nucleus | 23.46 | 20.58 |
| HORVU0Hr1G021800.1 | Barley | nucleus | 21.06 | 20.49 |
| KRG97141 | Soybean | nucleus | 23.46 | 20.42 |
| HORVU7Hr1G082720.10 | Barley | cytosol, nucleus | 21.82 | 20.26 |
| KRH47938 | Soybean | nucleus | 22.32 | 19.8 |
| KRH06502 | Soybean | nucleus | 22.19 | 19.73 |
| Solyc01g095590.2.1 | Tomato | nucleus | 22.7 | 18.61 |
| Solyc08g082040.2.1 | Tomato | nucleus | 21.31 | 17.88 |
| PGSC0003DMT400032053 | Potato | nucleus | 21.31 | 17.86 |
| PGSC0003DMT400000290 | Potato | nucleus | 22.32 | 17.63 |
| KRG99688 | Soybean | cytosol | 1.01 | 11.76 |
Protein Annotations
| EMBL:AK356210 | EnsemblPlants:HORVU3Hr1G055550.3 | EnsemblPlantsGene:HORVU3Hr1G055550 | InterPro:Zinc_ribbon_12 | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF6 |
| PFAM:PF11331 | SEG:seg | UniParc:UPI0002004C1B | UniProt:F2CX57 | MapMan:35.2 | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CX57]
Coordinates
chrchr3H:+:411942546..411949927
Molecular Weight (calculated)
88923.1 Da
IEP (calculated)
6.378
GRAVY (calculated)
-0.955
Length
793 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDLKEMKYR RRIGLEERAQ CSDQRGVDWG VLKQDPVELL RKLDELRDQI TRSCQVAQQP REHRRVGRRP PSLLPELPEP VPLPGYHRPR YGGGARYGHG
101: LPLSPCEPHH SDHGERYARQ SSGSGRYRQY PGRQWDNGGN YHQYGCASPH YPHGQRAAPQ EEHIPMARYF AGQHECYRFE RSPSISSDYD QRSVASSLYS
201: HRSVSKKRAE YFRKKAEHLC RPMHGAAPFV VCSSCYHLLQ VPVEKCMGWK QNRLQCGSCS EIISVKRMKG KAIPYTSSPS FSLSKTEQSS HDRMRREFEH
301: QHHDDVTSAF YNLNEHSSMQ INIDFGDDNS VSSTISHDER TDKECGSNRS IQSKADGISL SPRRSGDIES PKDILCERDA DCEEEHSVDC PISPCSPILE
401: DKLVDPLCSQ EKHNCSEDLG MDNGSDLNCK GEYNVNDDES VSMGSEQKVN EAELVEESMC RKHDQKNKED HCSSLEDVSK MQNSTKGDPD RNEKCECASK
501: NDVRSSPESE GTCKKYDRNS KEDETSGLEV ENISNEFDKN NAVDSNIALE HANTAIEFEG TSTSERSEEN LMEQHNGKLH EPCAEDANAL TESGSSVNGR
601: TNSGFSRGSS EAGLDEDQSS TGKSGDSSFF AGFLKKGFKD LSLFNQSMDS VKVSINGHPI SERALKKAEK KAGPVEPGSY WYDCRAGFWG IMGRECIGII
701: PPYIREFNYP MTRNCAGGDT DVIVNGRELH KRDLDLLVGR GLPRISGKSY SIEISGNVTD EANGKKLRSL GKLAPTIEKL KRGFGMHVPE EFR
101: LPLSPCEPHH SDHGERYARQ SSGSGRYRQY PGRQWDNGGN YHQYGCASPH YPHGQRAAPQ EEHIPMARYF AGQHECYRFE RSPSISSDYD QRSVASSLYS
201: HRSVSKKRAE YFRKKAEHLC RPMHGAAPFV VCSSCYHLLQ VPVEKCMGWK QNRLQCGSCS EIISVKRMKG KAIPYTSSPS FSLSKTEQSS HDRMRREFEH
301: QHHDDVTSAF YNLNEHSSMQ INIDFGDDNS VSSTISHDER TDKECGSNRS IQSKADGISL SPRRSGDIES PKDILCERDA DCEEEHSVDC PISPCSPILE
401: DKLVDPLCSQ EKHNCSEDLG MDNGSDLNCK GEYNVNDDES VSMGSEQKVN EAELVEESMC RKHDQKNKED HCSSLEDVSK MQNSTKGDPD RNEKCECASK
501: NDVRSSPESE GTCKKYDRNS KEDETSGLEV ENISNEFDKN NAVDSNIALE HANTAIEFEG TSTSERSEEN LMEQHNGKLH EPCAEDANAL TESGSSVNGR
601: TNSGFSRGSS EAGLDEDQSS TGKSGDSSFF AGFLKKGFKD LSLFNQSMDS VKVSINGHPI SERALKKAEK KAGPVEPGSY WYDCRAGFWG IMGRECIGII
701: PPYIREFNYP MTRNCAGGDT DVIVNGRELH KRDLDLLVGR GLPRISGKSY SIEISGNVTD EANGKKLRSL GKLAPTIEKL KRGFGMHVPE EFR
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.