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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G331200.1 Wheat cytosol 96.08 96.08
TraesCS5B01G325100.1 Wheat cytosol 95.59 95.59
TraesCS5A01G324300.1 Wheat cytosol 95.1 95.1
TraesCS5B01G325300.1 Wheat cytosol 87.25 88.12
TraesCS5D01G331400.1 Wheat cytosol, plastid 86.76 87.62
TraesCS5A01G324500.1 Wheat cytosol 82.84 85.35
Zm00001d018712_P001 Maize cytosol 60.29 53.02
Os02t0455400-00 Rice endoplasmic reticulum, plasma membrane 69.12 52.61
GSMUA_Achr8P19380_001 Banana cytosol 53.43 50.23
GSMUA_AchrUn_... Banana cytosol 52.45 49.08
EER97893 Sorghum cytosol 58.82 48.58
GSMUA_Achr5P18770_001 Banana cytosol 48.53 45.62
CDY51807 Canola cytosol 24.51 40.98
AT2G45360.1 Thale cress cytosol 42.16 40.0
VIT_15s0048g00700.t01 Wine grape cytosol 42.16 39.81
Bra040314.1-P Field mustard cytosol 41.67 38.12
CDY57106 Canola cytosol 41.67 38.12
CDY37036 Canola cytosol 41.67 38.12
VIT_02s0241g00100.t01 Wine grape cytosol 38.73 36.74
KRH57302 Soybean cytosol 38.73 36.57
Bra007560.1-P Field mustard cytosol 38.24 35.94
Bra004904.1-P Field mustard cytosol 38.73 35.75
CDX74734 Canola cytosol 38.73 35.75
PGSC0003DMT400010101 Potato cytosol 38.24 35.62
KRH04025 Soybean cytosol 38.24 35.62
CDY41141 Canola cytosol 38.24 35.62
CDY52349 Canola cytosol 37.75 35.48
CDX71783 Canola cytosol 37.75 35.32
Solyc08g079480.2.1 Tomato cytosol 37.75 35.16
Bra007557.1-P Field mustard plastid 37.75 35.16
KRH76237 Soybean cytosol 38.24 34.98
AT3G60780.1 Thale cress plastid 36.76 34.4
KRH28022 Soybean cytosol 34.8 34.3
KRH65304 Soybean cytosol 38.73 34.05
AT1G62840.1 Thale cress cytosol 36.27 33.04
Bra019758.1-P Field mustard cytosol 35.29 32.73
CDX98072 Canola cytosol 35.29 32.73
Bra016780.1-P Field mustard cytosol 34.8 32.57
CDY21045 Canola cytosol 34.8 32.57
AT1G12320.1 Thale cress cytosol 33.82 32.55
CDY31260 Canola cytosol 33.82 31.65
Bra026975.1-P Field mustard cytosol 33.82 31.65
Solyc08g007480.1.1 Tomato cytosol 33.82 31.65
CDY26557 Canola cytosol 33.82 31.65
CDY15992 Canola cytosol 33.82 31.65
CDY59673 Canola cytosol 34.31 31.25
Bra034527.1-P Field mustard cytosol 34.31 31.25
CDY34691 Canola cytosol 34.31 31.25
PGSC0003DMT400032504 Potato cytosol 33.33 31.19
Solyc10g018200.1.1 Tomato cytosol 33.82 30.8
CDY25700 Canola cytosol 32.35 29.6
KRH77415 Soybean plastid 37.25 29.57
CDY30071 Canola cytosol 29.41 29.13
PGSC0003DMT400024806 Potato cytosol 25.98 28.04
GSMUA_Achr11P... Banana cytosol 25.98 22.75
Protein Annotations
EnsemblPlants:HORVU5Hr1G082620.1EnsemblPlantsGene:HORVU5Hr1G082620InterPro:DUF1442PANTHER:PTHR33593PANTHER:PTHR33593:SF2PFAM:PF07279
SEG:segUniParc:UPI000B46C894UniProt:A0A287S110MapMan:35.2::
Description
No Description!
Coordinates
chrchr5H:-:568038766..568039758
Molecular Weight (calculated)
21385.6 Da
IEP (calculated)
9.742
GRAVY (calculated)
-0.088
Length
204 amino acids
Sequence
(BLAST)
001: MKLVWCPETA SQAFIAGVSA LSDSEHGPAG SAGVAELVSA MVGGWNAQLV VEAPEVSAPD SATMSLALAA AAGRTGGRYA HVLPDKDADG AMAELEGVDF
101: LVVDARRRDA AAVLAAARPG PRGMVVVRHG DGRRPGTKAL EASMAAGTRV VRSVYLPVDK GVEVLHVGVG KGPSLQFRRH RSASSRWIRH VDHKTGEEHL
201: FRRP
Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)
001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.