Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034527.1-P | Field mustard | cytosol | 99.55 | 99.55 |
| CDY34691 | Canola | cytosol | 98.21 | 98.21 |
| CDY25700 | Canola | cytosol | 88.84 | 89.24 |
| AT1G62840.1 | Thale cress | cytosol | 86.16 | 86.16 |
| CDY15992 | Canola | cytosol | 66.96 | 68.81 |
| CDY26557 | Canola | cytosol | 66.07 | 67.89 |
| CDY21045 | Canola | cytosol | 65.18 | 66.97 |
| CDY31260 | Canola | cytosol | 63.84 | 65.6 |
| CDX98072 | Canola | cytosol | 63.84 | 65.0 |
| CDY30071 | Canola | cytosol | 58.48 | 63.59 |
| Solyc08g007480.1.1 | Tomato | cytosol | 45.09 | 46.33 |
| PGSC0003DMT400032504 | Potato | cytosol | 44.2 | 45.41 |
| PGSC0003DMT400010101 | Potato | cytosol | 44.2 | 45.21 |
| Solyc08g079480.2.1 | Tomato | cytosol | 43.75 | 44.75 |
| CDY37036 | Canola | cytosol | 44.2 | 44.39 |
| CDX74734 | Canola | cytosol | 43.75 | 44.34 |
| CDY57106 | Canola | cytosol | 42.41 | 42.6 |
| CDY41141 | Canola | cytosol | 41.52 | 42.47 |
| CDY52349 | Canola | cytosol | 41.07 | 42.4 |
| CDX71783 | Canola | cytosol | 41.07 | 42.2 |
| CDY51807 | Canola | cytosol | 20.98 | 38.52 |
| GSMUA_Achr8P19380_001 | Banana | cytosol | 35.71 | 36.87 |
| TraesCS5A01G324500.1 | Wheat | cytosol | 31.25 | 35.35 |
| TraesCS5B01G325300.1 | Wheat | cytosol | 31.7 | 35.15 |
| TraesCS5D01G331200.1 | Wheat | cytosol | 31.25 | 34.31 |
| TraesCS5B01G325100.1 | Wheat | cytosol | 31.25 | 34.31 |
| HORVU5Hr1G082620.1 | Barley | cytosol | 31.25 | 34.31 |
| TraesCS5D01G331400.1 | Wheat | cytosol, plastid | 30.8 | 34.16 |
| GSMUA_Achr5P18770_001 | Banana | cytosol | 33.04 | 34.1 |
| TraesCS5A01G324300.1 | Wheat | cytosol | 30.8 | 33.82 |
| Zm00001d018712_P001 | Maize | cytosol | 34.82 | 33.62 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.14 | 33.03 |
| EER97893 | Sorghum | cytosol | 34.82 | 31.58 |
| Os02t0455400-00 | Rice | endoplasmic reticulum, plasma membrane | 34.82 | 29.1 |
| GSMUA_Achr11P... | Banana | cytosol | 24.55 | 23.61 |
| CDY69766 | Canola | cytosol | 24.55 | 22.63 |
| CDY00273 | Canola | cytosol | 24.11 | 22.22 |
| CDY69982 | Canola | cytosol | 23.66 | 21.72 |
| CDX87243 | Canola | cytosol | 23.21 | 21.31 |
| CDY16780 | Canola | cytosol | 22.77 | 20.9 |
| CDX86908 | Canola | extracellular | 21.43 | 19.05 |
Protein Annotations
| EnsemblPlants:CDY59673 | EnsemblPlantsGene:GSBRNA2T00027544001 | InterPro:DUF1442 | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF2 | PFAM:PF07279 |
| ProteinID:CDY59673 | ProteinID:CDY59673.1 | UniParc:UPI0004EE94D9 | UniProt:A0A078J8G8 | MapMan:35.2 | : |
Description
BnaA03g59600DBnaA03g59600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8G8]
Coordinates
chrLK033794:-:25462..26312
Molecular Weight (calculated)
24608.2 Da
IEP (calculated)
7.018
GRAVY (calculated)
-0.250
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLIWSPETA SKAYIDTVKS CEKLGTPGPA ELVAAMAAGW NATLIVETWS EGETIAISVG LNVASQHTNA RHMCIVPNAI SEAAYLQAMT QQYCSTLPET
101: IIMNEEEEGN SENTMQMLQG IDFLVIDWDQ KDFAANVLRN AAFGSRGAVV VCRSGYRRST SCFSWTKAFS DRNVVRTVTL PVSGGLEIAH VAAARSSGKN
201: DNNNKRKWIK HIDQRSGEEH VIRK
101: IIMNEEEEGN SENTMQMLQG IDFLVIDWDQ KDFAANVLRN AAFGSRGAVV VCRSGYRRST SCFSWTKAFS DRNVVRTVTL PVSGGLEIAH VAAARSSGKN
201: DNNNKRKWIK HIDQRSGEEH VIRK
001: MKLIWSPETA SKAYIDTVKS CENLGTPGAA ELVAAMAAGW NANLIVETWS EGETIAISVG LNIASRHTNG RHICIVPNAR SQTAYLQAMA EQSCSNLPET
101: IIMNEEGEEL EHTMQTLQGI DFLVVDWDQK DFAANVLRNA VFGSRGAVVV CRSGYRRSTS CFSWTKAFSD RNVVRTVTLP VSGGLEIAHV AAARSSGKSD
201: NNSNKRKWIK HFDQRSGEEH VIRK
101: IIMNEEGEEL EHTMQTLQGI DFLVVDWDQK DFAANVLRNA VFGSRGAVVV CRSGYRRSTS CFSWTKAFSD RNVVRTVTLP VSGGLEIAHV AAARSSGKSD
201: NNSNKRKWIK HFDQRSGEEH VIRK
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:Q9SI67]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.