Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59673 | Canola | cytosol | 98.21 | 98.21 |
| CDY25700 | Canola | cytosol | 87.95 | 88.34 |
| AT1G62840.1 | Thale cress | cytosol | 87.05 | 87.05 |
| CDY15992 | Canola | cytosol | 67.86 | 69.72 |
| CDY26557 | Canola | cytosol | 66.52 | 68.35 |
| CDY21045 | Canola | cytosol | 65.62 | 67.43 |
| CDY31260 | Canola | cytosol | 64.29 | 66.06 |
| CDX98072 | Canola | cytosol | 64.73 | 65.91 |
| CDY30071 | Canola | cytosol | 59.38 | 64.56 |
| Solyc08g007480.1.1 | Tomato | cytosol | 45.54 | 46.79 |
| PGSC0003DMT400032504 | Potato | cytosol | 44.64 | 45.87 |
| PGSC0003DMT400010101 | Potato | cytosol | 44.2 | 45.21 |
| Solyc08g079480.2.1 | Tomato | cytosol | 43.75 | 44.75 |
| CDY37036 | Canola | cytosol | 43.75 | 43.95 |
| CDX74734 | Canola | cytosol | 43.3 | 43.89 |
| CDY41141 | Canola | cytosol | 41.52 | 42.47 |
| CDY52349 | Canola | cytosol | 41.07 | 42.4 |
| CDX71783 | Canola | cytosol | 41.07 | 42.2 |
| CDY57106 | Canola | cytosol | 41.96 | 42.15 |
| CDY51807 | Canola | cytosol | 20.98 | 38.52 |
| GSMUA_Achr8P19380_001 | Banana | cytosol | 35.27 | 36.41 |
| TraesCS5B01G325300.1 | Wheat | cytosol | 31.7 | 35.15 |
| TraesCS5A01G324500.1 | Wheat | cytosol | 30.8 | 34.85 |
| TraesCS5B01G325100.1 | Wheat | cytosol | 31.25 | 34.31 |
| TraesCS5D01G331200.1 | Wheat | cytosol | 31.25 | 34.31 |
| HORVU5Hr1G082620.1 | Barley | cytosol | 31.25 | 34.31 |
| TraesCS5D01G331400.1 | Wheat | cytosol, plastid | 30.8 | 34.16 |
| TraesCS5A01G324300.1 | Wheat | cytosol | 30.8 | 33.82 |
| GSMUA_Achr5P18770_001 | Banana | cytosol | 32.59 | 33.64 |
| Zm00001d018712_P001 | Maize | cytosol | 34.38 | 33.19 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.7 | 32.57 |
| EER97893 | Sorghum | cytosol | 35.27 | 31.98 |
| Os02t0455400-00 | Rice | endoplasmic reticulum, plasma membrane | 34.38 | 28.73 |
| GSMUA_Achr11P... | Banana | cytosol | 24.11 | 23.18 |
| CDY69766 | Canola | cytosol | 24.55 | 22.63 |
| CDY00273 | Canola | cytosol | 24.11 | 22.22 |
| CDY69982 | Canola | cytosol | 23.66 | 21.72 |
| CDX87243 | Canola | cytosol | 23.66 | 21.72 |
| CDY16780 | Canola | cytosol | 23.21 | 21.31 |
| CDX86908 | Canola | extracellular | 21.43 | 19.05 |
Protein Annotations
| EnsemblPlants:CDY34691 | EnsemblPlantsGene:GSBRNA2T00057201001 | InterPro:DUF1442 | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF2 | PFAM:PF07279 |
| ProteinID:CDY34691 | ProteinID:CDY34691.1 | SEG:seg | UniParc:UPI0004EE924B | UniProt:A0A078HAG8 | MapMan:35.2 |
Description
BnaC04g19920DBnaC04g19920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAG8]
Coordinates
chrLK032339:+:360872..361717
Molecular Weight (calculated)
24532.0 Da
IEP (calculated)
6.667
GRAVY (calculated)
-0.245
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLIWSPETA SKAYIDTVKS CEKLGTPGAA ELVAAMAAGW NATLIVETWS EGETIDISVG LNVASQHTNA RHICIVPNAI SEAAYLQAMT QQSCSTLPET
101: IIMNEEEEGN SENTMQMLQG IDFLVIDWDQ KDFAANVLRN AAFGSRGAVV VCRSGYRRST SCFSWTKAFS DRNVVRTVTL PVSGGLEIAH VAAARSSGKN
201: DNNNKRKWIK HIDQRSGEEH VIRK
101: IIMNEEEEGN SENTMQMLQG IDFLVIDWDQ KDFAANVLRN AAFGSRGAVV VCRSGYRRST SCFSWTKAFS DRNVVRTVTL PVSGGLEIAH VAAARSSGKN
201: DNNNKRKWIK HIDQRSGEEH VIRK
001: MKLIWSPETA SKAYIDTVKS CENLGTPGAA ELVAAMAAGW NANLIVETWS EGETIAISVG LNIASRHTNG RHICIVPNAR SQTAYLQAMA EQSCSNLPET
101: IIMNEEGEEL EHTMQTLQGI DFLVVDWDQK DFAANVLRNA VFGSRGAVVV CRSGYRRSTS CFSWTKAFSD RNVVRTVTLP VSGGLEIAHV AAARSSGKSD
201: NNSNKRKWIK HFDQRSGEEH VIRK
101: IIMNEEGEEL EHTMQTLQGI DFLVVDWDQK DFAANVLRNA VFGSRGAVVV CRSGYRRSTS CFSWTKAFSD RNVVRTVTLP VSGGLEIAHV AAARSSGKSD
201: NNSNKRKWIK HFDQRSGEEH VIRK
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:Q9SI67]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.