CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035898.1-P	Field mustard	cytosol	99.18	99.18
CDX87243	Canola	cytosol	93.85	93.85
AT5G62280.1	Thale cress	cytosol	84.84	87.71
CDY69766	Canola	cytosol	86.48	86.83
CDY69982	Canola	cytosol	86.48	86.48
CDY00273	Canola	cytosol	85.66	86.01
CDX86908	Canola	extracellular	80.74	78.17
VIT_16s0022g01630.t01	Wine grape	cytosol, plastid	53.69	59.82
KRG92460	Soybean	cytosol, plastid	50.41	55.16
KRH34338	Soybean	cytosol, plastid	50.0	54.46
KRH38734	Soybean	cytosol, plastid	48.77	53.6
PGSC0003DMT400059241	Potato	cytosol, plastid	45.49	51.39
Solyc03g083500.2.1	Tomato	cytosol	45.08	50.93
KRH09236	Soybean	cytosol	37.7	50.83
GSMUA_Achr5P18780_001	Banana	cytosol	39.34	45.07
CDY37036	Canola	cytosol	26.64	29.15
CDX74734	Canola	cytosol	25.82	28.51
CDY57106	Canola	cytosol	25.41	27.8
CDY51807	Canola	cytosol	13.52	27.05
CDY41141	Canola	cytosol	23.77	26.48
CDY52349	Canola	cytosol	23.36	26.27
CDX71783	Canola	cytosol	23.36	26.15
CDY26557	Canola	cytosol	22.95	25.69
CDX98072	Canola	cytosol	22.95	25.45
CDY31260	Canola	cytosol	22.54	25.23
CDY21045	Canola	cytosol	22.54	25.23
CDY15992	Canola	cytosol	22.54	25.23
CDY34691	Canola	cytosol	21.31	23.21
CDY30071	Canola	cytosol	19.26	22.82
CDY59673	Canola	cytosol	20.9	22.77
CDY25700	Canola	cytosol	19.67	21.52

Protein Annotations

EnsemblPlants:CDY16780	EnsemblPlantsGene:GSBRNA2T00094658001	Gene3D:3.40.50.150	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF3
PFAM:PF07279	ProteinID:CDY16780	ProteinID:CDY16780.1	SEG:seg	UniParc:UPI0004EDDE85	UniProt:A0A078FQM9
MapMan:35.2	:	:	:	:	:

Description

BnaA09g06020DBnaA09g06020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQM9]

Coordinates

chrLK032067:-:337028..338152

Molecular Weight (calculated)

26975.0 Da

IEP (calculated)

7.213

GRAVY (calculated)

-0.274

Length

244 amino acids

Sequence
(BLAST)

001: MAFWSAENAT KAYLSTLKTD QRSKEPNVAE FISALAAGNN ARKIAVACAG AANTDILVAL IAAANQTRGQ VVCVLCGIEE LIISKKMLEL SEIHHIHFVV
101: GESSDNNLIN DHFGEADFVL VDCNLENHQD IVTKIVNHHE ENARSDGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGG GLLVTRVNDN GNYNQQMMMN
201: KNNHHHRHHD RVRKSHWVVK VDKCTGEEHV FRVRVPRGEA IIEA

Best Arabidopsis Sequence Match ( AT5G62280.1 )
(BLAST)

001: MAFWSAENAT KAYLSTLKTD QRTKEPNVAE FISALAAGNS ARKIAVACAG AANADILVAL IAAANQTRGQ VVCVLRGIEE LIISQKMLEP SEIHQIQFVV
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA

Arabidopsis Description

At5g62280 [Source:UniProtKB/TrEMBL;Acc:Q9LVA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.