CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09236	Soybean	cytosol	65.32	80.11
KRG92460	Soybean	cytosol, plastid	73.42	73.09
KRH34338	Soybean	cytosol, plastid	71.62	70.98
VIT_16s0022g01630.t01	Wine grape	cytosol, plastid	63.51	64.38
Solyc03g083500.2.1	Tomato	cytosol	53.6	55.09
PGSC0003DMT400059241	Potato	cytosol, plastid	52.25	53.7
AT5G62280.1	Thale cress	cytosol	54.5	51.27
GSMUA_Achr5P18780_001	Banana	cytosol	47.75	49.77
CDX87243	Canola	cytosol	54.5	49.59
CDY69766	Canola	cytosol	54.05	49.38
Bra010072.1-P	Field mustard	cytosol	53.6	48.97
CDY00273	Canola	cytosol	53.6	48.97
CDY16780	Canola	cytosol	53.6	48.77
Bra035898.1-P	Field mustard	cytosol	53.6	48.77
CDY69982	Canola	cytosol	52.7	47.95
Bra029269.1-P	Field mustard	cytosol	52.7	47.76
KRH65296	Soybean	cytosol	46.4	47.03
CDX86908	Canola	extracellular	49.1	43.25
KRH47906	Soybean	nucleus	32.88	30.67
KRG97184	Soybean	cytosol	18.92	30.43
KRH65304	Soybean	cytosol	30.18	28.88
KRH06462	Soybean	vacuole	24.77	28.06
KRH76237	Soybean	cytosol	27.93	27.8
KRH57302	Soybean	cytosol	26.58	27.31
KRH28022	Soybean	cytosol	25.23	27.05
KRH04025	Soybean	cytosol	26.13	26.48
KRH77415	Soybean	plastid	27.48	23.74

Protein Annotations

EMBL:ACUP02005870	EnsemblPlants:KRH38734	EnsemblPlantsGene:GLYMA_09G154500	EntrezGene:100805528	Gene3D:3.40.50.150	InterPro:DUF1442
PANTHER:PTHR33593	PANTHER:PTHR33593:SF3	PFAM:PF07279	ProteinID:KRH38734	ProteinID:KRH38734.1	UniParc:UPI00023388DF
UniProt:I1L3L2	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:37755594..37756899

Molecular Weight (calculated)

23490.5 Da

IEP (calculated)

8.884

GRAVY (calculated)

0.095

Length

222 amino acids

Sequence
(BLAST)

001: MACWSAENAT KAYLNTLKMG QKAKEPAVAE FISALAAGNN AQLMVVACAG AADSTTLALV TAAHQTGGHV VCIVPRHEDL SASKKVLIGV NASQVQFMVG
101: EAQQELVMLS QADFVLIDCN LVNHGEIVKA IQVGGMQNGT VVVGYNALNC RGSWWSCGSK TQLLPIGKGL LVTRSGASAT SPKYGSEMSK TKSSRWIVKV
201: DKCTGEEHVY RIRVPQGKVI QA

Best Arabidopsis Sequence Match ( AT5G62280.1 )
(BLAST)

001: MAFWSAENAT KAYLSTLKTD QRTKEPNVAE FISALAAGNS ARKIAVACAG AANADILVAL IAAANQTRGQ VVCVLRGIEE LIISQKMLEP SEIHQIQFVV
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA

Arabidopsis Description

At5g62280 [Source:UniProtKB/TrEMBL;Acc:Q9LVA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.