Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- peroxisome 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400059241 | Potato | cytosol, plastid | 95.83 | 95.83 |
| VIT_16s0022g01630.t01 | Wine grape | cytosol, plastid | 60.65 | 59.82 |
| Solyc06g034410.2.1 | Tomato | cytosol | 55.56 | 55.56 |
| KRG92460 | Soybean | cytosol, plastid | 56.94 | 55.16 |
| KRH34338 | Soybean | cytosol, plastid | 56.02 | 54.02 |
| KRH38734 | Soybean | cytosol, plastid | 55.09 | 53.6 |
| Solyc03g083490.2.1 | Tomato | plastid | 52.31 | 52.8 |
| KRH09236 | Soybean | cytosol | 43.98 | 52.49 |
| GSMUA_Achr5P18780_001 | Banana | cytosol | 48.61 | 49.3 |
| AT5G62280.1 | Thale cress | cytosol | 50.93 | 46.61 |
| CDY69766 | Canola | cytosol | 51.85 | 46.09 |
| Bra035898.1-P | Field mustard | cytosol | 51.39 | 45.49 |
| CDY16780 | Canola | cytosol | 50.93 | 45.08 |
| CDX87243 | Canola | cytosol | 50.93 | 45.08 |
| CDY00273 | Canola | cytosol | 50.46 | 44.86 |
| Bra010072.1-P | Field mustard | cytosol | 50.46 | 44.86 |
| CDY69982 | Canola | cytosol | 50.46 | 44.67 |
| Bra029269.1-P | Field mustard | cytosol | 50.46 | 44.49 |
| Solyc01g091250.2.1 | Tomato | cytosol | 43.52 | 43.52 |
| CDX86908 | Canola | extracellular | 47.22 | 40.48 |
| Solyc08g007480.1.1 | Tomato | cytosol | 30.56 | 30.28 |
| Solyc08g079480.2.1 | Tomato | cytosol | 27.31 | 26.94 |
| Solyc10g018200.1.1 | Tomato | cytosol | 27.78 | 26.79 |
| Solyc01g095920.2.1 | Tomato | cytosol | 27.31 | 25.99 |
Protein Annotations
| EnsemblPlants:Solyc03g083500.2.1 | EnsemblPlantsGene:Solyc03g083500.2 | Gene3D:3.40.50.150 | InterPro:DUF1442 | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF3 |
| PFAM:PF07279 | SEG:seg | UniParc:UPI0002768CD8 | UniProt:K4BIC6 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr3:+:53426841..53427699
Molecular Weight (calculated)
23736.7 Da
IEP (calculated)
8.818
GRAVY (calculated)
-0.102
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCWSAENAT KAFLKTMNMG KRANEPNGAE FISALAAGNN AQIMVVACAN VADSTTLALV AAAQQTGGRV ICILRGIEEL HLSKLALGTN SSQLEFVVVN
101: SQTLELLLPN YYKDADFIAV DCNIQNHEEI LGSLRKSRRD KSTIVLGYNA FCKESWKSSP LRTQLLPIGE GLLLTRVAAK MKVDTDRGHW IVKVDKCTGE
201: EHVYRVKSPR RRVVEA
101: SQTLELLLPN YYKDADFIAV DCNIQNHEEI LGSLRKSRRD KSTIVLGYNA FCKESWKSSP LRTQLLPIGE GLLLTRVAAK MKVDTDRGHW IVKVDKCTGE
201: EHVYRVKSPR RRVVEA
001: MAFWSAENAT KAYLSTLKTD QRTKEPNVAE FISALAAGNS ARKIAVACAG AANADILVAL IAAANQTRGQ VVCVLRGIEE LIISQKMLEP SEIHQIQFVV
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA
Arabidopsis Description
At5g62280 [Source:UniProtKB/TrEMBL;Acc:Q9LVA8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.