Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92460 | Soybean | cytosol, plastid | 68.49 | 67.26 |
| KRH34338 | Soybean | cytosol, plastid | 67.58 | 66.07 |
| KRH38734 | Soybean | cytosol, plastid | 64.38 | 63.51 |
| PGSC0003DMT400059241 | Potato | cytosol, plastid | 60.27 | 61.11 |
| Solyc03g083500.2.1 | Tomato | cytosol | 59.82 | 60.65 |
| KRH09236 | Soybean | cytosol | 48.4 | 58.56 |
| GSMUA_Achr5P18780_001 | Banana | cytosol | 54.79 | 56.34 |
| AT5G62280.1 | Thale cress | cytosol | 58.9 | 54.66 |
| Bra035898.1-P | Field mustard | cytosol | 59.82 | 53.69 |
| CDY16780 | Canola | cytosol | 59.82 | 53.69 |
| CDY69766 | Canola | cytosol | 59.36 | 53.5 |
| CDX87243 | Canola | cytosol | 59.36 | 53.28 |
| Bra010072.1-P | Field mustard | cytosol | 58.45 | 52.67 |
| CDY00273 | Canola | cytosol | 58.45 | 52.67 |
| CDY69982 | Canola | cytosol | 58.45 | 52.46 |
| Bra029269.1-P | Field mustard | cytosol | 57.53 | 51.43 |
| CDX86908 | Canola | extracellular | 53.88 | 46.83 |
| VIT_15s0046g00720.t01 | Wine grape | cytosol | 36.53 | 33.61 |
| VIT_02s0241g00100.t01 | Wine grape | cytosol | 28.77 | 29.3 |
| VIT_15s0048g00700.t01 | Wine grape | cytosol | 27.85 | 28.24 |
| VIT_18s0001g03860.t01 | Wine grape | cytosol | 26.94 | 27.31 |
Protein Annotations
| ArrayExpress:VIT_16s0022g01630 | EMBL:FN595506 | EnsemblPlants:VIT_16s0022g01630.t01 | EnsemblPlantsGene:VIT_16s0022g01630 | EntrezGene:100265251 | EntrezGene:LOC100265251 |
| Gene3D:3.40.50.150 | InterPro:DUF1442 | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF3 | PFAM:PF07279 | ProteinID:CBI24525 |
| ProteinID:CBI24525.3 | RefSeq:XP_002266318 | RefSeq:XP_002266318.1 | SEG:seg | UniParc:UPI00015CB9E3 | UniProt:D7T235 |
| wikigene:100265251 | wikigene:LOC100265251 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr16:-:13715867..13716674
Molecular Weight (calculated)
23231.2 Da
IEP (calculated)
8.296
GRAVY (calculated)
0.110
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MACWSAENAT KAYLSTLKMG HRAKEPDVAE FISALAAGNN AQLMVVACAS VTSSTALALA AAAHQTGGRV VCILRGLEEL HSSKMLLGLD ACHIEFVVGE
101: AQTLLLNDYM EADFVLIDCN LENHEGILRA VQAGGKPNGA VVIGYNAFGK GTWRVNGSKT QLLPIGEGLL VTRIGAKAKV NGSCGGVGKR SHWVVKVDKC
201: TGEEHVFRVR FPQGKRIEA
101: AQTLLLNDYM EADFVLIDCN LENHEGILRA VQAGGKPNGA VVIGYNAFGK GTWRVNGSKT QLLPIGEGLL VTRIGAKAKV NGSCGGVGKR SHWVVKVDKC
201: TGEEHVFRVR FPQGKRIEA
001: MAFWSAENAT KAYLSTLKTD QRTKEPNVAE FISALAAGNS ARKIAVACAG AANADILVAL IAAANQTRGQ VVCVLRGIEE LIISQKMLEP SEIHQIQFVV
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA
Arabidopsis Description
At5g62280 [Source:UniProtKB/TrEMBL;Acc:Q9LVA8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.