Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P08470_001 | Banana | cytosol | 43.52 | 41.96 |
| VIT_15s0046g00720.t01 | Wine grape | cytosol | 35.19 | 31.93 |
| VIT_16s0022g01630.t01 | Wine grape | cytosol, plastid | 27.31 | 26.94 |
| VIT_15s0048g00700.t01 | Wine grape | cytosol | 24.07 | 24.07 |
| VIT_02s0241g00100.t01 | Wine grape | cytosol | 20.37 | 20.47 |
Protein Annotations
| ArrayExpress:VIT_18s0001g03860 | EMBL:AM475007 | EMBL:FN595996 | EnsemblPlants:VIT_18s0001g03860.t01 | EnsemblPlantsGene:VIT_18s0001g03860 | EntrezGene:104877967 |
| Gene3D:3.40.50.150 | InterPro:DUF1442 | InterPro:SAM-dependent_MTases | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF1 | PFAM:PF07279 |
| ProteinID:CAN68418 | ProteinID:CAN68418.1 | ProteinID:CBI31258 | ProteinID:CBI31258.3 | RefSeq:XP_010645865.1 | SUPFAM:SSF53335 |
| UniParc:UPI00015CC1FF | UniProt:D7TL86 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr18_random:+:3564037..3564877
Molecular Weight (calculated)
24400.5 Da
IEP (calculated)
7.394
GRAVY (calculated)
-0.177
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MKWSPQDAME AYLQTLQVCK DHYNQDCTEY GGATKCIQPQ CMEFISALAA GNQAKLMVQI LSNEGVNPLT IALAVAAKHT GGRFICVLDQ QQDMEDCKAQ
101: LSCYDLEDKV EFVHGNPCEI VIQFKSIDFA VIDCKFEDHL KLFKTIDVNP RGSIVLVSNL VRRRNGVSFG EVVRRKKGVE YVTLHIGQGM VLTRIGFTCN
201: GHETRRYKRF HVTFES
101: LSCYDLEDKV EFVHGNPCEI VIQFKSIDFA VIDCKFEDHL KLFKTIDVNP RGSIVLVSNL VRRRNGVSFG EVVRRKKGVE YVTLHIGQGM VLTRIGFTCN
201: GHETRRYKRF HVTFES
001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.