Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g03860.t01 | Wine grape | cytosol | 41.96 | 43.52 |
| GSMUA_Achr6P13950_001 | Banana | mitochondrion | 31.7 | 28.74 |
| GSMUA_Achr5P18780_001 | Banana | cytosol | 27.23 | 28.64 |
| GSMUA_Achr8P19380_001 | Banana | cytosol | 22.32 | 23.04 |
| GSMUA_Achr5P18770_001 | Banana | cytosol | 21.88 | 22.58 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.54 | 21.1 |
| GSMUA_Achr11P... | Banana | cytosol | 15.62 | 15.02 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P08470_001 | EnsemblPlants:GSMUA_Achr8T08470_001 | EnsemblPlantsGene:GSMUA_Achr8G08470_001 | Gene3D:3.40.50.150 | InterPro:DUF1442 | InterPro:SAM-dependent_MTases |
| ncoils:Coil | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF1 | PFAM:PF07279 | SEG:seg | SUPFAM:SSF53335 |
| UniParc:UPI000295ECBF | UniProt:M0TNQ0 | MapMan:35.2 | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G08470_001]
Coordinates
chr8:-:5661120..5661870
Molecular Weight (calculated)
24636.6 Da
IEP (calculated)
6.864
GRAVY (calculated)
-0.140
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFWSPLDAM KAYMHTLQLC KDYYSEEEGA TRSSKIVEPE CMEYISALAA GNQARSMVDI ESGGMSPAIL ALAAAARQTG GRVVCVRHEQ AHLEALRRQI
101: ESLDLADVVE CKRGEPLESI RQLESVDFAV VDHRLEHCRE LVSAIDVNPR GSVVVVSNLF QGRRAAASYG QLVKERAVAK SVVLPFGDGM EVTRIGRAAK
201: HGCHGGRRVT RQFVVYYEDS NLAI
101: ESLDLADVVE CKRGEPLESI RQLESVDFAV VDHRLEHCRE LVSAIDVNPR GSVVVVSNLF QGRRAAASYG QLVKERAVAK SVVLPFGDGM EVTRIGRAAK
201: HGCHGGRRVT RQFVVYYEDS NLAI
001: MKLIWSPETA SKAYIDTVKS CENLGTPGAA ELVAAMAAGW NANLIVETWS EGETIAISVG LNIASRHTNG RHICIVPNAR SQTAYLQAMA EQSCSNLPET
101: IIMNEEGEEL EHTMQTLQGI DFLVVDWDQK DFAANVLRNA VFGSRGAVVV CRSGYRRSTS CFSWTKAFSD RNVVRTVTLP VSGGLEIAHV AAARSSGKSD
201: NNSNKRKWIK HFDQRSGEEH VIRK
101: IIMNEEGEEL EHTMQTLQGI DFLVVDWDQK DFAANVLRNA VFGSRGAVVV CRSGYRRSTS CFSWTKAFSD RNVVRTVTLP VSGGLEIAHV AAARSSGKSD
201: NNSNKRKWIK HFDQRSGEEH VIRK
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:Q9SI67]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.