Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 2
- peroxisome 1
- nucleus 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P18770_001 | Banana | cytosol | 38.2 | 41.01 |
| GSMUA_Achr8P19380_001 | Banana | cytosol | 36.91 | 39.63 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.76 | 33.95 |
| CDY21045 | Canola | cytosol | 26.18 | 27.98 |
| KRH04025 | Soybean | cytosol | 26.18 | 27.85 |
| TraesCS5A01G324500.1 | Wheat | cytosol | 23.61 | 27.78 |
| VIT_15s0048g00700.t01 | Wine grape | cytosol | 25.32 | 27.31 |
| CDY31260 | Canola | cytosol | 25.32 | 27.06 |
| CDY26557 | Canola | cytosol | 25.32 | 27.06 |
| Bra016780.1-P | Field mustard | cytosol | 25.32 | 27.06 |
| Bra026975.1-P | Field mustard | cytosol | 25.32 | 27.06 |
| VIT_02s0241g00100.t01 | Wine grape | cytosol | 24.89 | 26.98 |
| AT1G12320.1 | Thale cress | cytosol | 24.46 | 26.89 |
| TraesCS5B01G325300.1 | Wheat | cytosol | 23.18 | 26.73 |
| CDY15992 | Canola | cytosol | 24.89 | 26.61 |
| PGSC0003DMT400010101 | Potato | cytosol | 24.89 | 26.48 |
| TraesCS5B01G325100.1 | Wheat | cytosol | 23.18 | 26.47 |
| TraesCS5D01G331200.1 | Wheat | cytosol | 23.18 | 26.47 |
| KRH76237 | Soybean | cytosol | 25.32 | 26.46 |
| KRH57302 | Soybean | cytosol | 24.46 | 26.39 |
| AT1G62840.1 | Thale cress | cytosol | 25.32 | 26.34 |
| Zm00001d018712_P001 | Maize | cytosol | 26.18 | 26.29 |
| CDY52349 | Canola | cytosol | 24.46 | 26.27 |
| Bra007560.1-P | Field mustard | cytosol | 24.46 | 26.27 |
| TraesCS5D01G331400.1 | Wheat | cytosol, plastid | 22.75 | 26.24 |
| CDY30071 | Canola | cytosol | 23.18 | 26.21 |
| CDX71783 | Canola | cytosol | 24.46 | 26.15 |
| CDY41141 | Canola | cytosol | 24.46 | 26.03 |
| Solyc08g079480.2.1 | Tomato | cytosol | 24.46 | 26.03 |
| TraesCS5A01G324300.1 | Wheat | cytosol | 22.75 | 25.98 |
| HORVU5Hr1G082620.1 | Barley | cytosol | 22.75 | 25.98 |
| Bra019758.1-P | Field mustard | cytosol | 24.46 | 25.91 |
| CDX98072 | Canola | cytosol | 24.46 | 25.91 |
| KRH65304 | Soybean | cytosol | 25.75 | 25.86 |
| AT2G45360.1 | Thale cress | cytosol | 23.61 | 25.58 |
| Bra007557.1-P | Field mustard | plastid | 24.03 | 25.57 |
| CDX74734 | Canola | cytosol | 24.03 | 25.34 |
| Bra004904.1-P | Field mustard | cytosol | 24.03 | 25.34 |
| PGSC0003DMT400032504 | Potato | cytosol | 23.18 | 24.77 |
| Solyc08g007480.1.1 | Tomato | cytosol | 23.18 | 24.77 |
| EER97893 | Sorghum | cytosol | 26.18 | 24.7 |
| KRH28022 | Soybean | cytosol | 21.89 | 24.64 |
| Bra034527.1-P | Field mustard | cytosol | 23.61 | 24.55 |
| CDY59673 | Canola | cytosol | 23.61 | 24.55 |
| CDY57106 | Canola | cytosol | 23.18 | 24.22 |
| CDY34691 | Canola | cytosol | 23.18 | 24.11 |
| AT3G60780.1 | Thale cress | plastid | 22.32 | 23.85 |
| CDY37036 | Canola | cytosol | 22.75 | 23.77 |
| Bra040314.1-P | Field mustard | cytosol | 22.75 | 23.77 |
| CDY25700 | Canola | cytosol | 22.32 | 23.32 |
| Os02t0455400-00 | Rice | endoplasmic reticulum, plasma membrane | 26.61 | 23.13 |
| KRH77415 | Soybean | plastid | 24.46 | 22.18 |
| Solyc10g018200.1.1 | Tomato | cytosol | 20.17 | 20.98 |
| PGSC0003DMT400024806 | Potato | cytosol | 14.59 | 17.99 |
| GSMUA_Achr5P18780_001 | Banana | cytosol | 15.88 | 17.37 |
| GSMUA_Achr6P13950_001 | Banana | mitochondrion | 17.6 | 16.6 |
| GSMUA_Achr8P08470_001 | Banana | cytosol | 15.02 | 15.62 |
| CDY51807 | Canola | cytosol | 5.58 | 10.66 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P00920_001 | EnsemblPlants:GSMUA_Achr11T00920_001 | EnsemblPlantsGene:GSMUA_Achr11G00920_001 | InterPro:DUF1442 | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF2 |
| PFAM:PF07279 | SEG:seg | UniParc:UPI0002956AB4 | UniProt:M0RNC3 | MapMan:35.2 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G00920_001]
Coordinates
chr11:+:618194..618999
Molecular Weight (calculated)
23863.2 Da
IEP (calculated)
8.610
GRAVY (calculated)
-0.199
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLVWCPENA AKAYIDAVNA LADRDLEETN VAELVAAMAG GWRAQLIVEA WSRDAGAATG VGLRAAARHA RGRHVCHAGA GGGGPYGGGL PAQGRGEGVE
101: GGAAGAEGDG GGAQGSGQAA GRGCRGVRLG DEGGAVDVPS DRQRRGGAAC RRREGAELGR RPTTVVQALR SLHQGGACVP EEAVTSRSSL AALPPLYSLS
201: FYTVKRRPVK FPSMSISSFE LFVSVTCHSI ETL
101: GGAAGAEGDG GGAQGSGQAA GRGCRGVRLG DEGGAVDVPS DRQRRGGAAC RRREGAELGR RPTTVVQALR SLHQGGACVP EEAVTSRSSL AALPPLYSLS
201: FYTVKRRPVK FPSMSISSFE LFVSVTCHSI ETL
001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.