CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040314.1-P	Field mustard	cytosol	100.0	100.0
CDY57106	Canola	cytosol	91.48	91.48
AT2G45360.1	Thale cress	cytosol	85.65	88.84
CDX74734	Canola	cytosol	87.0	87.78
CDY51807	Canola	cytosol	41.7	76.23
CDY41141	Canola	cytosol	67.26	68.49
CDX71783	Canola	cytosol	66.82	68.35
CDY52349	Canola	cytosol	65.47	67.28
VIT_15s0048g00700.t01	Wine grape	cytosol	56.5	58.33
KRH76237	Soybean	cytosol	54.71	54.71
KRH65304	Soybean	cytosol	53.36	51.29
Solyc10g018200.1.1	Tomato	cytosol	50.22	50.0
CDX98072	Canola	cytosol	46.19	46.82
CDY15992	Canola	cytosol	45.29	46.33
CDY21045	Canola	cytosol	45.29	46.33
CDY26557	Canola	cytosol	44.84	45.87
CDY31260	Canola	cytosol	44.84	45.87
GSMUA_Achr8P19380_001	Banana	cytosol	44.39	45.62
PGSC0003DMT400024806	Potato	cytosol	38.12	44.97
CDY59673	Canola	cytosol	44.39	44.2
CDY34691	Canola	cytosol	43.95	43.75
TraesCS5D01G331200.1	Wheat	cytosol	39.01	42.65
CDY30071	Canola	cytosol	39.01	42.23
TraesCS5B01G325100.1	Wheat	cytosol	38.56	42.16
CDY25700	Canola	cytosol	42.15	42.15
TraesCS5A01G324500.1	Wheat	cytosol	37.22	41.92
TraesCS5A01G324300.1	Wheat	cytosol	38.12	41.67
HORVU5Hr1G082620.1	Barley	cytosol	38.12	41.67
GSMUA_Achr5P18770_001	Banana	cytosol	40.36	41.47
TraesCS5B01G325300.1	Wheat	cytosol	36.77	40.59
TraesCS5D01G331400.1	Wheat	cytosol, plastid	36.32	40.1
GSMUA_AchrUn_...	Banana	cytosol	38.56	39.45
Zm00001d018712_P001	Maize	cytosol	36.77	35.34
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	42.15	35.07
EER97893	Sorghum	cytosol	37.67	34.01
CDY69766	Canola	cytosol	29.6	27.16
CDX87243	Canola	cytosol	29.6	27.05
CDY00273	Canola	cytosol	29.15	26.75
CDY69982	Canola	cytosol	29.15	26.64
CDY16780	Canola	cytosol	29.15	26.64
CDX86908	Canola	extracellular	26.91	23.81
GSMUA_Achr11P...	Banana	cytosol	23.77	22.75

Protein Annotations

EnsemblPlants:CDY37036	EnsemblPlantsGene:GSBRNA2T00063243001	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF7	PFAM:PF07279
ProteinID:CDY37036	ProteinID:CDY37036.1	SEG:seg	UniParc:UPI0002544262	UniProt:A0A078HH67	MapMan:35.2

Description

BnaA04g26140DBnaA04g26140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HH67]

Coordinates

chrLK032390:+:118503..119262

Molecular Weight (calculated)

24570.4 Da

IEP (calculated)

9.827

GRAVY (calculated)

-0.172

Length

223 amino acids

Sequence
(BLAST)

001: MKLVWSPETA SEAYISTVRS CKSYKESGVA EFLSATAAGW NARLIVETWS RGDPLATSVG LAVAASHTCG RHVCIVPDEQ SRLEYVSAMR GVVTTEATEV
101: VVVRESVENT MEEFPGVDFL VVDSKRREFV KTLRFAKLSN KGAVLVCKNA AQRAISGFKW QDVLKKGTRV VRSVFLPVGS GLDMVHVGAA GGNQRGDSRK
201: HPSRWIRHVD HLSGEEHLFR RLN

Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)

001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.