Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040314.1-P | Field mustard | cytosol | 88.84 | 85.65 |
| CDY37036 | Canola | cytosol | 88.84 | 85.65 |
| Bra004904.1-P | Field mustard | cytosol | 84.65 | 82.35 |
| CDX74734 | Canola | cytosol | 84.65 | 82.35 |
| CDY57106 | Canola | cytosol | 85.12 | 82.06 |
| CDY51807 | Canola | cytosol | 39.53 | 69.67 |
| AT3G60780.1 | Thale cress | plastid | 67.91 | 66.97 |
| VIT_15s0048g00700.t01 | Wine grape | cytosol | 60.93 | 60.65 |
| KRH76237 | Soybean | cytosol | 58.14 | 56.05 |
| KRH65304 | Soybean | cytosol | 58.14 | 53.88 |
| Solyc10g018200.1.1 | Tomato | cytosol | 51.63 | 49.55 |
| AT1G12320.1 | Thale cress | cytosol | 46.98 | 47.64 |
| AT1G62840.1 | Thale cress | cytosol | 49.3 | 47.32 |
| GSMUA_Achr8P19380_001 | Banana | cytosol | 46.98 | 46.54 |
| PGSC0003DMT400024806 | Potato | cytosol | 39.07 | 44.44 |
| GSMUA_Achr5P18770_001 | Banana | cytosol | 43.72 | 43.32 |
| TraesCS5D01G331200.1 | Wheat | cytosol | 40.93 | 43.14 |
| TraesCS5B01G325100.1 | Wheat | cytosol | 40.47 | 42.65 |
| HORVU5Hr1G082620.1 | Barley | cytosol | 40.0 | 42.16 |
| TraesCS5A01G324300.1 | Wheat | cytosol | 40.0 | 42.16 |
| TraesCS5A01G324500.1 | Wheat | cytosol | 38.6 | 41.92 |
| GSMUA_AchrUn_... | Banana | cytosol | 41.86 | 41.28 |
| TraesCS5B01G325300.1 | Wheat | cytosol | 38.6 | 41.09 |
| TraesCS5D01G331400.1 | Wheat | cytosol, plastid | 38.14 | 40.59 |
| Os02t0455400-00 | Rice | endoplasmic reticulum, plasma membrane | 44.19 | 35.45 |
| Zm00001d018712_P001 | Maize | cytosol | 38.14 | 35.34 |
| EER97893 | Sorghum | cytosol | 40.47 | 35.22 |
| AT5G62280.1 | Thale cress | cytosol | 30.23 | 27.54 |
| GSMUA_Achr11P... | Banana | cytosol | 25.58 | 23.61 |
Protein Annotations
| MapMan:35.2 | EntrezGene:819144 | UniProt:A0A178VQQ1 | ProteinID:AAB82627.1 | ProteinID:AEC10543.1 | EMBL:AK118397 |
| ArrayExpress:AT2G45360 | EnsemblPlantsGene:AT2G45360 | RefSeq:AT2G45360 | TAIR:AT2G45360 | RefSeq:AT2G45360-TAIR-G | EnsemblPlants:AT2G45360.1 |
| TAIR:AT2G45360.1 | Unigene:At.36643 | EMBL:BT005233 | InterPro:DUF1442 | GO:GO:0008150 | RefSeq:NP_182061.1 |
| UniProt:O22136 | ProteinID:OAP08787.1 | PFAM:PF07279 | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF2 | UniParc:UPI000000C596 |
| SEG:seg | : | : | : | : | : |
Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
Coordinates
chr2:+:18698592..18699514
Molecular Weight (calculated)
23792.6 Da
IEP (calculated)
9.653
GRAVY (calculated)
-0.120
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.