Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G331200.1 | Wheat | cytosol | 53.88 | 61.27 |
| HORVU5Hr1G082620.1 | Barley | cytosol | 53.02 | 60.29 |
| TraesCS5B01G325100.1 | Wheat | cytosol | 53.02 | 60.29 |
| TraesCS5A01G324500.1 | Wheat | cytosol | 51.29 | 60.1 |
| EER97893 | Sorghum | cytosol | 63.79 | 59.92 |
| TraesCS5B01G325300.1 | Wheat | cytosol | 52.16 | 59.9 |
| TraesCS5A01G324300.1 | Wheat | cytosol | 52.59 | 59.8 |
| TraesCS5D01G331400.1 | Wheat | cytosol, plastid | 50.43 | 57.92 |
| Os02t0455400-00 | Rice | endoplasmic reticulum, plasma membrane | 59.48 | 51.49 |
| GSMUA_Achr8P19380_001 | Banana | cytosol | 47.84 | 51.15 |
| GSMUA_Achr5P18770_001 | Banana | cytosol | 43.1 | 46.08 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.1 | 45.87 |
| VIT_02s0241g00100.t01 | Wine grape | cytosol | 36.21 | 39.07 |
| VIT_15s0048g00700.t01 | Wine grape | cytosol | 36.21 | 38.89 |
| AT2G45360.1 | Thale cress | cytosol | 35.34 | 38.14 |
| KRH57302 | Soybean | cytosol | 34.48 | 37.04 |
| CDY37036 | Canola | cytosol | 35.34 | 36.77 |
| Bra040314.1-P | Field mustard | cytosol | 35.34 | 36.77 |
| CDY57106 | Canola | cytosol | 35.34 | 36.77 |
| KRH04025 | Soybean | cytosol | 34.48 | 36.53 |
| CDY41141 | Canola | cytosol | 34.05 | 36.07 |
| PGSC0003DMT400010101 | Potato | cytosol | 33.62 | 35.62 |
| Bra007557.1-P | Field mustard | plastid | 33.62 | 35.62 |
| Bra007560.1-P | Field mustard | cytosol | 33.19 | 35.48 |
| AT1G12320.1 | Thale cress | cytosol | 32.33 | 35.38 |
| CDX71783 | Canola | cytosol | 33.19 | 35.32 |
| CDX74734 | Canola | cytosol | 33.62 | 35.29 |
| Bra004904.1-P | Field mustard | cytosol | 33.62 | 35.29 |
| AT1G62840.1 | Thale cress | cytosol | 34.05 | 35.27 |
| Solyc08g079480.2.1 | Tomato | cytosol | 33.19 | 35.16 |
| CDY52349 | Canola | cytosol | 32.76 | 35.02 |
| CDY59673 | Canola | cytosol | 33.62 | 34.82 |
| Bra034527.1-P | Field mustard | cytosol | 33.62 | 34.82 |
| KRH28022 | Soybean | cytosol | 31.03 | 34.78 |
| CDY34691 | Canola | cytosol | 33.19 | 34.38 |
| Bra019758.1-P | Field mustard | cytosol | 31.9 | 33.64 |
| CDX98072 | Canola | cytosol | 31.9 | 33.64 |
| CDY25700 | Canola | cytosol | 32.33 | 33.63 |
| AT3G60780.1 | Thale cress | plastid | 31.47 | 33.49 |
| CDY21045 | Canola | cytosol | 31.47 | 33.49 |
| CDY26557 | Canola | cytosol | 31.03 | 33.03 |
| CDY15992 | Canola | cytosol | 31.03 | 33.03 |
| CDY31260 | Canola | cytosol | 31.03 | 33.03 |
| Bra026975.1-P | Field mustard | cytosol | 31.03 | 33.03 |
| Bra016780.1-P | Field mustard | cytosol | 31.03 | 33.03 |
| CDY51807 | Canola | cytosol | 17.24 | 32.79 |
| KRH65304 | Soybean | cytosol | 32.76 | 32.76 |
| KRH76237 | Soybean | cytosol | 31.47 | 32.74 |
| Solyc10g018200.1.1 | Tomato | cytosol | 31.03 | 32.14 |
| CDY30071 | Canola | cytosol | 28.45 | 32.04 |
| Solyc08g007480.1.1 | Tomato | cytosol | 29.31 | 31.19 |
| KRH77415 | Soybean | plastid | 34.05 | 30.74 |
| PGSC0003DMT400032504 | Potato | cytosol | 28.88 | 30.73 |
| PGSC0003DMT400024806 | Potato | cytosol | 23.28 | 28.57 |
| GSMUA_Achr11P... | Banana | cytosol | 26.29 | 26.18 |
Protein Annotations
| EnsemblPlants:Zm00001d018712_P001 | EnsemblPlants:Zm00001d018712_T001 | EnsemblPlantsGene:Zm00001d018712 | EntrezGene:103633653 | InterPro:DUF1442 | PANTHER:PTHR33593 |
| PANTHER:PTHR33593:SF2 | PFAM:PF07279 | ProteinID:ONM51159.1 | SEG:seg | UniParc:UPI000220C2F2 | UniProt:A0A1D6HRP7 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:-:2990363..2991061
Molecular Weight (calculated)
24052.5 Da
IEP (calculated)
10.728
GRAVY (calculated)
-0.265
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLVWCPDTA SKAYIDGVRA IAAAADYSDG GGSAELVAAM AGGWNAQLIV DAPADSAPPP PSAPSPNNNP PATSLALAAA ARHTGGRYAR LDAHPDEPAA
101: AAKAAMARLE GVDLLVLDAR RRDAAAVLRA ARPGPRGMVV VLRHADNTAA SASAAPLGRM AAGTRLVRAA YLPIGAGGLE VLHVGVGEGP SLPTTTTQQH
201: DHSSRRRRHG PGGRWIRHVN HRTGEEHVFR RQ
101: AAKAAMARLE GVDLLVLDAR RRDAAAVLRA ARPGPRGMVV VLRHADNTAA SASAAPLGRM AAGTRLVRAA YLPIGAGGLE VLHVGVGEGP SLPTTTTQQH
201: DHSSRRRRHG PGGRWIRHVN HRTGEEHVFR RQ
001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.