Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98072 | Canola | cytosol | 100.0 | 100.0 |
| Bra026975.1-P | Field mustard | cytosol | 84.55 | 85.32 |
| AT1G12320.1 | Thale cress | cytosol | 77.27 | 80.19 |
| Bra016780.1-P | Field mustard | cytosol | 79.09 | 79.82 |
| Bra034527.1-P | Field mustard | cytosol | 64.55 | 63.39 |
| Solyc08g007480.1.1 | Tomato | cytosol | 48.18 | 48.62 |
| PGSC0003DMT400010101 | Potato | cytosol | 48.18 | 48.4 |
| PGSC0003DMT400032504 | Potato | cytosol | 47.73 | 48.17 |
| Solyc08g079480.2.1 | Tomato | cytosol | 47.73 | 47.95 |
| Bra004904.1-P | Field mustard | cytosol | 47.27 | 47.06 |
| Bra040314.1-P | Field mustard | cytosol | 46.82 | 46.19 |
| Bra007560.1-P | Field mustard | cytosol | 45.45 | 46.08 |
| Bra007557.1-P | Field mustard | plastid | 45.0 | 45.21 |
| GSMUA_Achr8P19380_001 | Banana | cytosol | 37.73 | 38.25 |
| TraesCS5B01G325300.1 | Wheat | cytosol | 34.55 | 37.62 |
| TraesCS5A01G324500.1 | Wheat | cytosol | 33.18 | 36.87 |
| GSMUA_Achr5P18770_001 | Banana | cytosol | 35.45 | 35.94 |
| TraesCS5B01G325100.1 | Wheat | cytosol | 33.18 | 35.78 |
| TraesCS5D01G331200.1 | Wheat | cytosol | 33.18 | 35.78 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.45 | 35.78 |
| HORVU5Hr1G082620.1 | Barley | cytosol | 32.73 | 35.29 |
| TraesCS5D01G331400.1 | Wheat | cytosol, plastid | 32.27 | 35.15 |
| TraesCS5A01G324300.1 | Wheat | cytosol | 31.82 | 34.31 |
| Zm00001d018712_P001 | Maize | cytosol | 33.64 | 31.9 |
| EER97893 | Sorghum | cytosol | 35.0 | 31.17 |
| Os02t0455400-00 | Rice | endoplasmic reticulum, plasma membrane | 37.27 | 30.6 |
| GSMUA_Achr11P... | Banana | cytosol | 25.91 | 24.46 |
| Bra010072.1-P | Field mustard | cytosol | 25.91 | 23.46 |
| Bra029269.1-P | Field mustard | cytosol | 25.91 | 23.27 |
| Bra035898.1-P | Field mustard | cytosol | 25.45 | 22.95 |
Protein Annotations
Description
AT1G12320 (E=4e-094) | unknown protein
Coordinates
chrA06:-:4588337..4589135
Molecular Weight (calculated)
24193.7 Da
IEP (calculated)
8.221
GRAVY (calculated)
-0.241
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLVWSPETA SKAYLDTVKS CENLATPDAA ELISAMAAGW NAKLIVETWS CGDEIASSIG LNVASQHANA RHICIVQNSR TESAYLQAIQ EYSSPLNPPE
101: TIVSQEPENA MKEIQGVDFL VVDWRNKELA AAALRNAAFG SRGAVVVCRN GYSRCSSGFI WRRALRDREV VRTVTLPVTG GIEIAHVAAR NRNSGKSDKG
201: KRRWITHIDQ RSGEEHVFII
101: TIVSQEPENA MKEIQGVDFL VVDWRNKELA AAALRNAAFG SRGAVVVCRN GYSRCSSGFI WRRALRDREV VRTVTLPVTG GIEIAHVAAR NRNSGKSDKG
201: KRRWITHIDQ RSGEEHVFII
001: MKLVWSPETA SKAYIDTVKS CENLETPDAA ELIAAMAAGW NVKLIVETWS EGDAIASSIG LNVASKHANA KHICIVQNSR SESAYLQAIQ ESSSPLNFPE
101: TIVAEEPGKA MKKLQGVDFL VVDWRNKEFA AAALKNAAFG NRGAVVVCRN GYSSLRRVLR DRKVVRTVTL PVTGGIEIAH VAARNSGKSG NNKRRWITHV
201: DQRSGEEHVF SI
101: TIVAEEPGKA MKKLQGVDFL VVDWRNKEFA AAALKNAAFG NRGAVVVCRN GYSSLRRVLR DRKVVRTVTL PVTGGIEIAH VAARNSGKSG NNKRRWITHV
201: DQRSGEEHVF SI
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:Q9LNB3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.