CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019758.1-P	Field mustard	cytosol	100.0	100.0
CDY15992	Canola	cytosol	86.36	87.16
CDY26557	Canola	cytosol	84.55	85.32
CDY30071	Canola	cytosol	77.27	82.52
CDY31260	Canola	cytosol	80.0	80.73
CDY21045	Canola	cytosol	79.55	80.28
AT1G12320.1	Thale cress	cytosol	77.27	80.19
CDY34691	Canola	cytosol	65.91	64.73
CDY59673	Canola	cytosol	65.0	63.84
CDY25700	Canola	cytosol	60.45	59.64
Solyc08g007480.1.1	Tomato	cytosol	48.18	48.62
PGSC0003DMT400010101	Potato	cytosol	48.18	48.4
PGSC0003DMT400032504	Potato	cytosol	47.73	48.17
Solyc08g079480.2.1	Tomato	cytosol	47.73	47.95
CDX74734	Canola	cytosol	47.27	47.06
CDY37036	Canola	cytosol	46.82	46.19
CDY41141	Canola	cytosol	45.45	45.66
CDY52349	Canola	cytosol	45.0	45.62
CDX71783	Canola	cytosol	45.0	45.41
CDY57106	Canola	cytosol	45.0	44.39
CDY51807	Canola	cytosol	24.09	43.44
GSMUA_Achr8P19380_001	Banana	cytosol	37.73	38.25
TraesCS5B01G325300.1	Wheat	cytosol	34.55	37.62
TraesCS5A01G324500.1	Wheat	cytosol	33.18	36.87
GSMUA_Achr5P18770_001	Banana	cytosol	35.45	35.94
TraesCS5B01G325100.1	Wheat	cytosol	33.18	35.78
TraesCS5D01G331200.1	Wheat	cytosol	33.18	35.78
GSMUA_AchrUn_...	Banana	cytosol	35.45	35.78
HORVU5Hr1G082620.1	Barley	cytosol	32.73	35.29
TraesCS5D01G331400.1	Wheat	cytosol, plastid	32.27	35.15
TraesCS5A01G324300.1	Wheat	cytosol	31.82	34.31
Zm00001d018712_P001	Maize	cytosol	33.64	31.9
EER97893	Sorghum	cytosol	35.0	31.17
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	37.27	30.6
GSMUA_Achr11P...	Banana	cytosol	25.91	24.46
CDY69766	Canola	cytosol	26.82	24.28
CDY00273	Canola	cytosol	25.91	23.46
CDY16780	Canola	cytosol	25.45	22.95
CDY69982	Canola	cytosol	25.45	22.95
CDX87243	Canola	cytosol	25.45	22.95
CDX86908	Canola	extracellular	23.18	20.24

Protein Annotations

EnsemblPlants:CDX98072	EnsemblPlantsGene:GSBRNA2T00105451001	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF2	PFAM:PF07279
ProteinID:CDX98072	ProteinID:CDX98072.1	SEG:seg	UniParc:UPI000253ECF1	MapMan:35.2	:

Description

BnaA06g08230D

Coordinates

chrLK031902:-:857147..857987

Molecular Weight (calculated)

24193.7 Da

IEP (calculated)

8.221

GRAVY (calculated)

-0.241

Length

220 amino acids

Sequence
(BLAST)

001: MKLVWSPETA SKAYLDTVKS CENLATPDAA ELISAMAAGW NAKLIVETWS CGDEIASSIG LNVASQHANA RHICIVQNSR TESAYLQAIQ EYSSPLNPPE
101: TIVSQEPENA MKEIQGVDFL VVDWRNKELA AAALRNAAFG SRGAVVVCRN GYSRCSSGFI WRRALRDREV VRTVTLPVTG GIEIAHVAAR NRNSGKSDKG
201: KRRWITHIDQ RSGEEHVFII

Best Arabidopsis Sequence Match ( AT1G12320.1 )
(BLAST)

001: MKLVWSPETA SKAYIDTVKS CENLETPDAA ELIAAMAAGW NVKLIVETWS EGDAIASSIG LNVASKHANA KHICIVQNSR SESAYLQAIQ ESSSPLNFPE
101: TIVAEEPGKA MKKLQGVDFL VVDWRNKEFA AAALKNAAFG NRGAVVVCRN GYSSLRRVLR DRKVVRTVTL PVTGGIEIAH VAARNSGKSG NNKRRWITHV
201: DQRSGEEHVF SI

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:Q9LNB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.