Factsheet for TraesCS5D01G331400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G325300.1	Wheat	cytosol	92.08	92.08
TraesCS5A01G324500.1	Wheat	cytosol	88.12	89.9
TraesCS5D01G331200.1	Wheat	cytosol	87.62	86.76
HORVU5Hr1G082620.1	Barley	cytosol	87.62	86.76
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	67.33	50.75
Zm00001d018712_P001	Maize	cytosol	57.92	50.43
GSMUA_Achr8P19380_001	Banana	cytosol	51.98	48.39
EER97893	Sorghum	cytosol	58.42	47.77
GSMUA_AchrUn_...	Banana	cytosol	49.51	45.87
GSMUA_Achr5P18770_001	Banana	cytosol	46.04	42.86
CDY51807	Canola	cytosol	23.27	38.52
AT2G45360.1	Thale cress	cytosol	40.59	38.14
VIT_02s0241g00100.t01	Wine grape	cytosol	40.59	38.14
VIT_15s0048g00700.t01	Wine grape	cytosol	40.1	37.5
CDY57106	Canola	cytosol	40.1	36.32
CDY37036	Canola	cytosol	40.1	36.32
Bra040314.1-P	Field mustard	cytosol	40.1	36.32
KRH57302	Soybean	cytosol	38.61	36.11
PGSC0003DMT400010101	Potato	cytosol	38.61	35.62
Bra007560.1-P	Field mustard	cytosol	38.12	35.48
KRH28022	Soybean	cytosol	36.14	35.27
CDY41141	Canola	cytosol	38.12	35.16
KRH04025	Soybean	cytosol	38.12	35.16
Solyc08g079480.2.1	Tomato	cytosol	38.12	35.16
CDY52349	Canola	cytosol	37.62	35.02
CDX71783	Canola	cytosol	37.62	34.86
Bra007557.1-P	Field mustard	plastid	37.62	34.7
Bra004904.1-P	Field mustard	cytosol	37.62	34.39
CDX74734	Canola	cytosol	37.62	34.39
KRH65304	Soybean	cytosol	38.12	33.19
AT3G60780.1	Thale cress	plastid	35.64	33.03
CDY21045	Canola	cytosol	35.15	32.57
Bra016780.1-P	Field mustard	cytosol	35.15	32.57
KRH76237	Soybean	cytosol	35.64	32.29
Bra019758.1-P	Field mustard	cytosol	35.15	32.27
CDX98072	Canola	cytosol	35.15	32.27
Solyc08g007480.1.1	Tomato	cytosol	34.65	32.11
AT1G12320.1	Thale cress	cytosol	33.66	32.08
AT1G62840.1	Thale cress	cytosol	35.15	31.7
PGSC0003DMT400032504	Potato	cytosol	33.66	31.19
CDY15992	Canola	cytosol	33.66	31.19
Bra034527.1-P	Field mustard	cytosol	34.16	30.8
CDY59673	Canola	cytosol	34.16	30.8
CDY34691	Canola	cytosol	34.16	30.8
Bra026975.1-P	Field mustard	cytosol	33.17	30.73
CDY26557	Canola	cytosol	33.17	30.73
CDY31260	Canola	cytosol	32.67	30.28
KRH77415	Soybean	plastid	38.12	29.96
Solyc10g018200.1.1	Tomato	cytosol	33.17	29.91
CDY25700	Canola	cytosol	32.18	29.15
CDY30071	Canola	cytosol	28.22	27.67
PGSC0003DMT400024806	Potato	cytosol	25.25	26.98
GSMUA_Achr11P...	Banana	cytosol	26.24	22.75

Protein Annotations

EnsemblPlants:TraesCS5D01G331400.1	EnsemblPlantsGene:TraesCS5D01G331400	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF2	PFAM:PF07279
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:422436983..422437591

Molecular Weight (calculated)

21293.4 Da

IEP (calculated)

10.511

GRAVY (calculated)

-0.083

Length

202 amino acids

Sequence
(BLAST)

001: MKLVWCPETA SQAFIAGVSA LSESEHSPAG SAGVAELVSA MVGGWNAQLV VEAPEVSATD SATTSLALAA AAQRTGGRYA RVLADTDRVM AGLDGVDFLV
101: VDARRRDATA VLAAARPGAR GMVVVRHGDG RRRGTKALEA SMAAGTRIVR SVYLPVDKGV EVLHVGVGKG PSIQGRRSPR VSSRWIRHVD QETGEEHLFR
201: RQ

Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)

001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.