Factsheet for Bra007560.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52349	Canola	cytosol	99.08	99.08
Bra007557.1-P	Field mustard	plastid	98.16	97.26
AT3G60780.1	Thale cress	plastid	81.11	80.73
Bra040314.1-P	Field mustard	cytosol	67.28	65.47
Bra004904.1-P	Field mustard	cytosol	62.21	61.09
VIT_15s0048g00700.t01	Wine grape	cytosol	55.76	56.02
KRH76237	Soybean	cytosol	56.22	54.71
KRH65304	Soybean	cytosol	55.76	52.16
Solyc10g018200.1.1	Tomato	cytosol	51.15	49.55
Bra016780.1-P	Field mustard	cytosol	46.08	45.87
Bra019758.1-P	Field mustard	cytosol	46.08	45.45
Bra026975.1-P	Field mustard	cytosol	45.16	44.95
GSMUA_Achr8P19380_001	Banana	cytosol	44.24	44.24
PGSC0003DMT400024806	Potato	cytosol	38.25	43.92
Bra034527.1-P	Field mustard	cytosol	42.86	41.52
GSMUA_Achr5P18770_001	Banana	cytosol	40.55	40.55
TraesCS5D01G331200.1	Wheat	cytosol	36.41	38.73
TraesCS5A01G324500.1	Wheat	cytosol	35.02	38.38
HORVU5Hr1G082620.1	Barley	cytosol	35.94	38.24
TraesCS5B01G325100.1	Wheat	cytosol	35.94	38.24
TraesCS5D01G331400.1	Wheat	cytosol, plastid	35.48	38.12
TraesCS5A01G324300.1	Wheat	cytosol	35.48	37.75
GSMUA_AchrUn_...	Banana	cytosol	37.33	37.16
TraesCS5B01G325300.1	Wheat	cytosol	34.1	36.63
Zm00001d018712_P001	Maize	cytosol	35.48	33.19
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	39.17	31.72
EER97893	Sorghum	cytosol	35.02	30.77
Bra010072.1-P	Field mustard	cytosol	28.11	25.1
Bra029269.1-P	Field mustard	cytosol	28.11	24.9
GSMUA_Achr11P...	Banana	cytosol	26.27	24.46
Bra035898.1-P	Field mustard	cytosol	26.73	23.77

Protein Annotations

EnsemblPlants:Bra007560.1	EnsemblPlants:Bra007560.1-P	EnsemblPlantsGene:Bra007560	Gene3D:3.40.50.150	InterPro:DUF1442	PANTHER:PTHR33593
PANTHER:PTHR33593:SF2	PFAM:PF07279	UniParc:UPI00025428CF	UniProt:M4CTL6	MapMan:35.2	:

Description

AT3G60780 (E=4e-099) | unknown protein

Coordinates

chrA09:+:29796469..29797358

Molecular Weight (calculated)

23914.8 Da

IEP (calculated)

10.102

GRAVY (calculated)

-0.174

Length

217 amino acids

Sequence
(BLAST)

001: MKLVWSPETA SNAYIHTVIE RYKESSVAEY LSATAAGWNT RLIVETWKRG DPIATSVGLA VAAIHTRGRH ICIVPDEESR LEYETVMKRA VVSEATEIVV
101: GDSVEDVVDR LSGVDFLVVD SKRGEYVKAL GLANTSKMGA VLVCKNATQK SIPGFKWHRV LRRGTRVVRS VFLPVGRGLD IAHVGASGGG GDLKKVHSRW
201: IKHVDPRSGE EHLFKRK

Best Arabidopsis Sequence Match ( AT3G60780.1 )
(BLAST)

001: MRLVWSPETA SNAYIHTVRS CKSYRDSSVA EFLSATAAGW NTRLIVETWS RGDPIATSVG LAVAAIHTCG RHVCIVPDEE SRSEYEAVMR GAVTSDSTEV
101: MVLDSAEDVV ERISGVDFMV VDSKRHEFVN ALGLAKTSKM GAVLVCKNAT LKSIPGFKWQ GLLRRGTRVV RSVFLPVGRG LEIVHVGASG GGNGLRKIPS
201: RWIKHIDPRS GEEHLFKR

Arabidopsis Description

Uncharacterized protein T4C21_190 [Source:UniProtKB/TrEMBL;Acc:Q9LZY5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.