Factsheet for TraesCS5A01G324300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G331200.1	Wheat	cytosol	97.06	97.06
TraesCS5B01G325100.1	Wheat	cytosol	95.59	95.59
HORVU5Hr1G082620.1	Barley	cytosol	95.1	95.1
TraesCS5A01G324500.1	Wheat	cytosol	82.84	85.35
Zm00001d018712_P001	Maize	cytosol	59.8	52.59
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	67.16	51.12
GSMUA_Achr8P19380_001	Banana	cytosol	52.45	49.31
EER97893	Sorghum	cytosol	58.82	48.58
GSMUA_AchrUn_...	Banana	cytosol	50.49	47.25
GSMUA_Achr5P18770_001	Banana	cytosol	46.57	43.78
CDY51807	Canola	cytosol	25.0	41.8
AT2G45360.1	Thale cress	cytosol	42.16	40.0
VIT_15s0048g00700.t01	Wine grape	cytosol	42.16	39.81
CDY57106	Canola	cytosol	41.67	38.12
CDY37036	Canola	cytosol	41.67	38.12
Bra040314.1-P	Field mustard	cytosol	41.67	38.12
VIT_02s0241g00100.t01	Wine grape	cytosol	38.73	36.74
KRH57302	Soybean	cytosol	38.24	36.11
Bra004904.1-P	Field mustard	cytosol	38.73	35.75
CDX74734	Canola	cytosol	38.73	35.75
Bra007560.1-P	Field mustard	cytosol	37.75	35.48
KRH04025	Soybean	cytosol	37.75	35.16
CDY41141	Canola	cytosol	37.75	35.16
PGSC0003DMT400010101	Potato	cytosol	37.75	35.16
CDY52349	Canola	cytosol	37.25	35.02
CDX71783	Canola	cytosol	37.25	34.86
Solyc08g079480.2.1	Tomato	cytosol	37.25	34.7
Bra007557.1-P	Field mustard	plastid	37.25	34.7
KRH76237	Soybean	cytosol	37.25	34.08
AT3G60780.1	Thale cress	plastid	36.27	33.95
KRH28022	Soybean	cytosol	34.31	33.82
KRH65304	Soybean	cytosol	38.24	33.62
AT1G62840.1	Thale cress	cytosol	35.78	32.59
AT1G12320.1	Thale cress	cytosol	33.33	32.08
CDX98072	Canola	cytosol	34.31	31.82
Bra019758.1-P	Field mustard	cytosol	34.31	31.82
CDY21045	Canola	cytosol	33.33	31.19
Bra016780.1-P	Field mustard	cytosol	33.33	31.19
Solyc08g007480.1.1	Tomato	cytosol	33.33	31.19
Bra034527.1-P	Field mustard	cytosol	33.82	30.8
CDY59673	Canola	cytosol	33.82	30.8
CDY34691	Canola	cytosol	33.82	30.8
CDY15992	Canola	cytosol	32.84	30.73
Solyc10g018200.1.1	Tomato	cytosol	33.33	30.36
PGSC0003DMT400032504	Potato	cytosol	32.35	30.28
CDY26557	Canola	cytosol	32.35	30.28
CDY31260	Canola	cytosol	32.35	30.28
Bra026975.1-P	Field mustard	cytosol	32.35	30.28
KRH77415	Soybean	plastid	36.76	29.18
CDY25700	Canola	cytosol	31.86	29.15
CDY30071	Canola	cytosol	28.43	28.16
PGSC0003DMT400024806	Potato	cytosol	25.98	28.04
GSMUA_Achr11P...	Banana	cytosol	25.98	22.75

Protein Annotations

EnsemblPlants:TraesCS5A01G324300.1	EnsemblPlantsGene:TraesCS5A01G324300	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF2	PFAM:PF07279
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:535653628..535654242

Molecular Weight (calculated)

21370.5 Da

IEP (calculated)

8.911

GRAVY (calculated)

-0.134

Length

204 amino acids

Sequence
(BLAST)

001: MKLVWCPETA SQAFIAGVSA LSDSEHGPAG SAGVAELVCA MVGGWNAQLV AEAPEVSAPD SATTSLALAA AAGRTGGRYA RVLPDEDADR SMAELEGVDF
101: LVVDARRRDG AAVLAAARPG PRGMVVVRHG DGRRPGTKAL EASMAAGTRV VRSVYLPVDK GVEVLHVGVG KGPSLQCRRS RSASSRWIRH VDHKTGEEHL
201: FRRP

Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)

001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.