Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37036 | Canola | cytosol | 91.48 | 91.48 |
| AT2G45360.1 | Thale cress | cytosol | 82.06 | 85.12 |
| CDX74734 | Canola | cytosol | 79.82 | 80.54 |
| CDY51807 | Canola | cytosol | 40.81 | 74.59 |
| CDX71783 | Canola | cytosol | 70.4 | 72.02 |
| CDY41141 | Canola | cytosol | 69.51 | 70.78 |
| CDY52349 | Canola | cytosol | 67.71 | 69.59 |
| VIT_15s0048g00700.t01 | Wine grape | cytosol | 58.3 | 60.19 |
| KRH76237 | Soybean | cytosol | 55.16 | 55.16 |
| KRH65304 | Soybean | cytosol | 53.81 | 51.72 |
| Solyc10g018200.1.1 | Tomato | cytosol | 51.57 | 51.34 |
| GSMUA_Achr8P19380_001 | Banana | cytosol | 46.64 | 47.93 |
| PGSC0003DMT400024806 | Potato | cytosol | 39.46 | 46.56 |
| CDY15992 | Canola | cytosol | 44.39 | 45.41 |
| CDY21045 | Canola | cytosol | 44.39 | 45.41 |
| CDY26557 | Canola | cytosol | 44.39 | 45.41 |
| CDX98072 | Canola | cytosol | 44.39 | 45.0 |
| CDY31260 | Canola | cytosol | 43.95 | 44.95 |
| GSMUA_Achr5P18770_001 | Banana | cytosol | 42.6 | 43.78 |
| TraesCS5D01G331200.1 | Wheat | cytosol | 39.01 | 42.65 |
| CDY59673 | Canola | cytosol | 42.6 | 42.41 |
| TraesCS5B01G325100.1 | Wheat | cytosol | 38.56 | 42.16 |
| CDY34691 | Canola | cytosol | 42.15 | 41.96 |
| TraesCS5A01G324500.1 | Wheat | cytosol | 37.22 | 41.92 |
| CDY25700 | Canola | cytosol | 41.7 | 41.7 |
| TraesCS5A01G324300.1 | Wheat | cytosol | 38.12 | 41.67 |
| HORVU5Hr1G082620.1 | Barley | cytosol | 38.12 | 41.67 |
| GSMUA_AchrUn_... | Banana | cytosol | 40.36 | 41.28 |
| CDY30071 | Canola | cytosol | 38.12 | 41.26 |
| TraesCS5B01G325300.1 | Wheat | cytosol | 36.77 | 40.59 |
| TraesCS5D01G331400.1 | Wheat | cytosol, plastid | 36.32 | 40.1 |
| Os02t0455400-00 | Rice | endoplasmic reticulum, plasma membrane | 43.05 | 35.82 |
| Zm00001d018712_P001 | Maize | cytosol | 36.77 | 35.34 |
| EER97893 | Sorghum | cytosol | 38.12 | 34.41 |
| CDY69766 | Canola | cytosol | 28.7 | 26.34 |
| CDY00273 | Canola | cytosol | 28.25 | 25.93 |
| CDY69982 | Canola | cytosol | 28.25 | 25.82 |
| CDX87243 | Canola | cytosol | 28.25 | 25.82 |
| CDY16780 | Canola | cytosol | 27.8 | 25.41 |
| GSMUA_Achr11P... | Banana | cytosol | 24.22 | 23.18 |
| CDX86908 | Canola | extracellular | 26.01 | 23.02 |
Protein Annotations
| EnsemblPlants:CDY57106 | EnsemblPlantsGene:GSBRNA2T00020555001 | InterPro:DUF1442 | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF7 | PFAM:PF07279 |
| ProteinID:CDY57106 | ProteinID:CDY57106.1 | SEG:seg | UniParc:UPI0004EE0B27 | UniProt:A0A078J1K3 | MapMan:35.2 |
Description
BnaC04g56930DBnaC04g56930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1K3]
Coordinates
chrLK033547:+:26884..27643
Molecular Weight (calculated)
24612.4 Da
IEP (calculated)
8.959
GRAVY (calculated)
-0.147
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLVWSPETA SEAYINTVRF CKSYKESGVA EFLSATAAGW NARLIVETWS RDDPLATSVG LAVAASHTCG RHVCIVPDEQ SRLEYVSAMR GIVTTEATEV
101: VVVGESVENT MEEFPGVDFL VVDSKRREFV KTLRFAKLSN KGAVLVCKNA AQRAISGFKW HDVLKTGTRV VRSVFLPVGS GLDMVHVGAA GGNQRGDSRK
201: HPSRWIRHVD HLSGEEHLFR RLN
101: VVVGESVENT MEEFPGVDFL VVDSKRREFV KTLRFAKLSN KGAVLVCKNA AQRAISGFKW HDVLKTGTRV VRSVFLPVGS GLDMVHVGAA GGNQRGDSRK
201: HPSRWIRHVD HLSGEEHLFR RLN
001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.