CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029269.1-P	Field mustard	cytosol	93.44	93.06
CDY69766	Canola	cytosol	90.57	90.95
CDY00273	Canola	cytosol	89.75	90.12
AT5G62280.1	Thale cress	cytosol	85.25	88.14
CDX87243	Canola	cytosol	86.48	86.48
CDY16780	Canola	cytosol	86.48	86.48
CDX86908	Canola	extracellular	84.43	81.75
VIT_16s0022g01630.t01	Wine grape	cytosol, plastid	52.46	58.45
KRG92460	Soybean	cytosol, plastid	48.77	53.36
KRH38734	Soybean	cytosol, plastid	47.95	52.7
KRH34338	Soybean	cytosol, plastid	48.36	52.68
PGSC0003DMT400059241	Potato	cytosol, plastid	45.08	50.93
KRH09236	Soybean	cytosol	37.7	50.83
Solyc03g083500.2.1	Tomato	cytosol	44.67	50.46
GSMUA_Achr5P18780_001	Banana	cytosol	38.93	44.6
CDY37036	Canola	cytosol	26.64	29.15
CDX74734	Canola	cytosol	26.23	28.96
CDY51807	Canola	cytosol	14.34	28.69
CDY57106	Canola	cytosol	25.82	28.25
CDY41141	Canola	cytosol	24.59	27.4
CDY52349	Canola	cytosol	24.18	27.19
CDX71783	Canola	cytosol	24.18	27.06
CDY26557	Canola	cytosol	23.36	26.15
CDY21045	Canola	cytosol	22.95	25.69
CDY15992	Canola	cytosol	22.95	25.69
CDX98072	Canola	cytosol	22.95	25.45
CDY31260	Canola	cytosol	22.54	25.23
CDY59673	Canola	cytosol	21.72	23.66
CDY34691	Canola	cytosol	21.72	23.66
CDY30071	Canola	cytosol	19.67	23.3
CDY25700	Canola	cytosol	20.49	22.42

Protein Annotations

EnsemblPlants:CDY69982	EnsemblPlantsGene:GSBRNA2T00093998001	Gene3D:3.40.50.150	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF3
PFAM:PF07279	ProteinID:CDY69982	ProteinID:CDY69982.1	SEG:seg	UniParc:UPI0004EDBAEB	UniProt:A0A078JWN6
MapMan:35.2	:	:	:	:	:

Description

BnaAnng32220DBnaAnng32220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWN6]

Coordinates

chrLK040859:+:1379..2488

Molecular Weight (calculated)

26980.0 Da

IEP (calculated)

7.326

GRAVY (calculated)

-0.344

Length

244 amino acids

Sequence
(BLAST)

001: MAFWSAENAT KAYLTTLKTD QRTKEPNVAE FISALAAGNN ARKITVACAG AANADILVAL IAAANQTRGQ VVCVLRGIEE LIISKKMLEP SEIHHIQFVV
101: GEPNDNALIN DHFGEADFVL VDCKIKNHQD IVRKIVSQHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDD GSYNQKMMKK
201: NDDDYHQHHD HVRKSNWVVK VDKCTGEEHV FRVRVPRGEA TIEA

Best Arabidopsis Sequence Match ( AT5G62280.1 )
(BLAST)

001: MAFWSAENAT KAYLSTLKTD QRTKEPNVAE FISALAAGNS ARKIAVACAG AANADILVAL IAAANQTRGQ VVCVLRGIEE LIISQKMLEP SEIHQIQFVV
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA

Arabidopsis Description

At5g62280 [Source:UniProtKB/TrEMBL;Acc:Q9LVA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.