CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74734	Canola	cytosol	79.51	43.89
CDY37036	Canola	cytosol	76.23	41.7
CDY57106	Canola	cytosol	74.59	40.81
AT2G45360.1	Thale cress	cytosol	69.67	39.53
CDY52349	Canola	cytosol	56.56	31.8
CDX71783	Canola	cytosol	55.74	31.19
CDY41141	Canola	cytosol	55.74	31.05
VIT_15s0048g00700.t01	Wine grape	cytosol	53.28	30.09
PGSC0003DMT400024806	Potato	cytosol	42.62	27.51
KRH76237	Soybean	cytosol	49.18	26.91
KRH65304	Soybean	cytosol	49.18	25.86
TraesCS5A01G324300.1	Wheat	cytosol	41.8	25.0
TraesCS5D01G331200.1	Wheat	cytosol	41.8	25.0
TraesCS5B01G325100.1	Wheat	cytosol	41.8	25.0
HORVU5Hr1G082620.1	Barley	cytosol	40.98	24.51
TraesCS5A01G324500.1	Wheat	cytosol	39.34	24.24
CDX98072	Canola	cytosol	43.44	24.09
CDY15992	Canola	cytosol	41.8	23.39
TraesCS5B01G325300.1	Wheat	cytosol	38.52	23.27
TraesCS5D01G331400.1	Wheat	cytosol, plastid	38.52	23.27
Solyc10g018200.1.1	Tomato	cytosol	42.62	23.21
CDY26557	Canola	cytosol	40.98	22.94
CDY31260	Canola	cytosol	39.34	22.02
CDY21045	Canola	cytosol	39.34	22.02
CDY59673	Canola	cytosol	38.52	20.98
CDY34691	Canola	cytosol	38.52	20.98
CDY25700	Canola	cytosol	37.7	20.63
GSMUA_Achr8P19380_001	Banana	cytosol	36.07	20.28
CDY30071	Canola	cytosol	32.79	19.42
GSMUA_AchrUn_...	Banana	cytosol	34.43	19.27
EER97893	Sorghum	cytosol	38.52	19.03
GSMUA_Achr5P18770_001	Banana	cytosol	33.61	18.89
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	38.52	17.54
Zm00001d018712_P001	Maize	cytosol	32.79	17.24
CDX87243	Canola	cytosol	29.51	14.75
CDY69982	Canola	cytosol	28.69	14.34
CDY69766	Canola	cytosol	27.87	13.99
CDY00273	Canola	cytosol	27.05	13.58
CDY16780	Canola	cytosol	27.05	13.52
CDX86908	Canola	extracellular	27.05	13.1
GSMUA_Achr11P...	Banana	cytosol	10.66	5.58

Protein Annotations

EnsemblPlants:CDY51807	EnsemblPlantsGene:GSBRNA2T00004273001	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF2	PFAM:PF07279
ProteinID:CDY51807	ProteinID:CDY51807.1	SEG:seg	UniParc:UPI0004EDD865	UniProt:A0A078IPE5	MapMan:35.2

Description

BnaC04g53130DBnaC04g53130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPE5]

Coordinates

chrLK033030:-:9665..10066

Molecular Weight (calculated)

13442.0 Da

IEP (calculated)

10.189

GRAVY (calculated)

-0.420

Length

122 amino acids

Sequence
(BLAST)

001: MRGAVATEAT EVVVVRESTE NTMEEFPGVD FLVVDSKRRD NKGAVLVCKN AAQRAASGFK WQDVLNGGTR VARSVFLPVG NGLDIAHVGA IGGHQRGESR
101: KHPSRWIRHV DHLSGEEHLF RR

Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)

001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.