Factsheet for GSMUA_Achr8P19380_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	78.8	78.44
GSMUA_Achr5P18770_001	Banana	cytosol	76.04	76.04
TraesCS5D01G331200.1	Wheat	cytosol	50.23	53.43
HORVU5Hr1G082620.1	Barley	cytosol	50.23	53.43
TraesCS5B01G325100.1	Wheat	cytosol	49.77	52.94
TraesCS5A01G324500.1	Wheat	cytosol	47.93	52.53
TraesCS5B01G325300.1	Wheat	cytosol	48.85	52.48
TraesCS5A01G324300.1	Wheat	cytosol	49.31	52.45
TraesCS5D01G331400.1	Wheat	cytosol, plastid	48.39	51.98
VIT_02s0241g00100.t01	Wine grape	cytosol	47.93	48.37
Zm00001d018712_P001	Maize	cytosol	51.15	47.84
KRH57302	Soybean	cytosol	47.47	47.69
KRH04025	Soybean	cytosol	47.93	47.49
AT2G45360.1	Thale cress	cytosol	46.54	46.98
CDY57106	Canola	cytosol	47.93	46.64
PGSC0003DMT400010101	Potato	cytosol	47.0	46.58
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	57.14	46.27
Solyc08g079480.2.1	Tomato	cytosol	46.54	46.12
VIT_15s0048g00700.t01	Wine grape	cytosol	44.7	44.91
KRH28022	Soybean	cytosol	42.4	44.44
CDY37036	Canola	cytosol	45.62	44.39
Bra040314.1-P	Field mustard	cytosol	45.62	44.39
Bra007560.1-P	Field mustard	cytosol	44.24	44.24
CDY52349	Canola	cytosol	43.78	43.78
CDX74734	Canola	cytosol	44.24	43.44
Bra004904.1-P	Field mustard	cytosol	44.24	43.44
CDY41141	Canola	cytosol	43.78	43.38
Bra007557.1-P	Field mustard	plastid	43.78	43.38
CDX71783	Canola	cytosol	43.32	43.12
EER97893	Sorghum	cytosol	48.39	42.51
AT3G60780.1	Thale cress	plastid	41.94	41.74
KRH76237	Soybean	cytosol	41.47	40.36
CDY21045	Canola	cytosol	39.63	39.45
KRH77415	Soybean	plastid	46.54	39.3
AT1G12320.1	Thale cress	cytosol	38.25	39.15
Solyc08g007480.1.1	Tomato	cytosol	39.17	38.99
Solyc10g018200.1.1	Tomato	cytosol	40.09	38.84
Bra016780.1-P	Field mustard	cytosol	38.71	38.53
KRH65304	Soybean	cytosol	41.01	38.36
PGSC0003DMT400024806	Potato	cytosol	33.18	38.1
CDY26557	Canola	cytosol	38.25	38.07
Bra026975.1-P	Field mustard	cytosol	38.25	38.07
CDY15992	Canola	cytosol	38.25	38.07
PGSC0003DMT400032504	Potato	cytosol	38.25	38.07
Bra019758.1-P	Field mustard	cytosol	38.25	37.73
CDX98072	Canola	cytosol	38.25	37.73
CDY31260	Canola	cytosol	37.79	37.61
AT1G62840.1	Thale cress	cytosol	38.25	37.05
GSMUA_Achr11P...	Banana	cytosol	39.63	36.91
CDY51807	Canola	cytosol	20.28	36.07
CDY59673	Canola	cytosol	36.87	35.71
Bra034527.1-P	Field mustard	cytosol	36.87	35.71
CDY25700	Canola	cytosol	36.41	35.43
CDY34691	Canola	cytosol	36.41	35.27
CDY30071	Canola	cytosol	33.18	34.95
GSMUA_Achr5P18780_001	Banana	cytosol	28.57	29.11
GSMUA_Achr6P13950_001	Banana	mitochondrion	28.11	24.7
GSMUA_Achr8P08470_001	Banana	cytosol	23.04	22.32

Protein Annotations

EnsemblPlants:GSMUA_Achr8P19380_001	EnsemblPlants:GSMUA_Achr8T19380_001	EnsemblPlantsGene:GSMUA_Achr8G19380_001	Gene3D:3.40.50.150	InterPro:DUF1442	PANTHER:PTHR33593
PANTHER:PTHR33593:SF2	PFAM:PF07279	SEG:seg	UniParc:UPI00029517C1	UniProt:M0TRU1	MapMan:35.2

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G19380_001]

Coordinates

chr8:+:24638572..24639225

Molecular Weight (calculated)

23070.9 Da

IEP (calculated)

9.384

GRAVY (calculated)

-0.113

Length

217 amino acids

Sequence
(BLAST)

001: MKLVWCPETA SKAYIDAVTA LADRNLEEIN VAELVSAMAG GWKAQLIVEA WARDAGAATG VGLRAAAKHG RGRHVCVVPG EQSAAEYVDA MRRAGAAVEA
101: ESVVVGEAEE VMRELEGVDL MVVDCRRRDA GRVLREARPG PRGMVVVCKG AGRRRGGAAV ALGAGTRVVR STYLPVGCGV EVLHVGVGNG PSLGGRGGRW
201: IRHVDRDTKE EHVFRRR

Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)

001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.