Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26557 | Canola | cytosol | 100.0 | 100.0 |
| Bra016780.1-P | Field mustard | cytosol | 87.61 | 87.61 |
| Bra019758.1-P | Field mustard | cytosol | 85.32 | 84.55 |
| AT1G12320.1 | Thale cress | cytosol | 81.65 | 83.96 |
| Bra034527.1-P | Field mustard | cytosol | 67.89 | 66.07 |
| Solyc08g007480.1.1 | Tomato | cytosol | 48.17 | 48.17 |
| PGSC0003DMT400010101 | Potato | cytosol | 48.17 | 47.95 |
| Solyc08g079480.2.1 | Tomato | cytosol | 47.71 | 47.49 |
| PGSC0003DMT400032504 | Potato | cytosol | 46.79 | 46.79 |
| Bra004904.1-P | Field mustard | cytosol | 46.79 | 46.15 |
| Bra007560.1-P | Field mustard | cytosol | 44.95 | 45.16 |
| Bra040314.1-P | Field mustard | cytosol | 45.87 | 44.84 |
| Bra007557.1-P | Field mustard | plastid | 44.5 | 44.29 |
| GSMUA_Achr8P19380_001 | Banana | cytosol | 38.07 | 38.25 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.7 | 36.7 |
| GSMUA_Achr5P18770_001 | Banana | cytosol | 35.78 | 35.94 |
| TraesCS5B01G325300.1 | Wheat | cytosol | 33.03 | 35.64 |
| TraesCS5A01G324500.1 | Wheat | cytosol | 32.11 | 35.35 |
| HORVU5Hr1G082620.1 | Barley | cytosol | 31.65 | 33.82 |
| TraesCS5B01G325100.1 | Wheat | cytosol | 31.65 | 33.82 |
| TraesCS5D01G331200.1 | Wheat | cytosol | 31.65 | 33.82 |
| TraesCS5D01G331400.1 | Wheat | cytosol, plastid | 30.73 | 33.17 |
| TraesCS5A01G324300.1 | Wheat | cytosol | 30.28 | 32.35 |
| Zm00001d018712_P001 | Maize | cytosol | 33.03 | 31.03 |
| EER97893 | Sorghum | cytosol | 34.4 | 30.36 |
| Os02t0455400-00 | Rice | endoplasmic reticulum, plasma membrane | 35.78 | 29.1 |
| GSMUA_Achr11P... | Banana | cytosol | 27.06 | 25.32 |
| Bra010072.1-P | Field mustard | cytosol | 26.61 | 23.87 |
| Bra029269.1-P | Field mustard | cytosol | 26.61 | 23.67 |
| Bra035898.1-P | Field mustard | cytosol | 25.69 | 22.95 |
Protein Annotations
Description
AT1G12320 (E=3e-103) | unknown protein
Coordinates
chrA09:-:34571367..34572118
Molecular Weight (calculated)
23916.4 Da
IEP (calculated)
8.483
GRAVY (calculated)
-0.203
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLVWSPETA SKAYLDTVKS CENLETPDAA ELISAMAAGW NAKLIVETWS YGDAIASSIG LNVASQHANA KHVCIVQNAR SESAYLQAIQ ESSSPLNLPK
101: TIIAEEPEMA MKEIQGIDFL VVDWRNKEFA AGALRNAAFG SRGAVVVCRN GYSRSSSGFS WRRALREREV VRTVTLPVTG GIEIAHVAAR NSGKIEKSKR
201: RWITHIDQRS GEEHVFSI
101: TIIAEEPEMA MKEIQGIDFL VVDWRNKEFA AGALRNAAFG SRGAVVVCRN GYSRSSSGFS WRRALREREV VRTVTLPVTG GIEIAHVAAR NSGKIEKSKR
201: RWITHIDQRS GEEHVFSI
001: MKLVWSPETA SKAYIDTVKS CENLETPDAA ELIAAMAAGW NVKLIVETWS EGDAIASSIG LNVASKHANA KHICIVQNSR SESAYLQAIQ ESSSPLNFPE
101: TIVAEEPGKA MKKLQGVDFL VVDWRNKEFA AAALKNAAFG NRGAVVVCRN GYSSLRRVLR DRKVVRTVTL PVTGGIEIAH VAARNSGKSG NNKRRWITHV
201: DQRSGEEHVF SI
101: TIVAEEPGKA MKKLQGVDFL VVDWRNKEFA AAALKNAAFG NRGAVVVCRN GYSSLRRVLR DRKVVRTVTL PVTGGIEIAH VAARNSGKSG NNKRRWITHV
201: DQRSGEEHVF SI
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:Q9LNB3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.