Factsheet for GSMUA_Achr5P18770_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P19380_001	Banana	cytosol	76.04	76.04
GSMUA_AchrUn_...	Banana	cytosol	69.59	69.27
HORVU5Hr1G082620.1	Barley	cytosol	45.62	48.53
TraesCS5D01G331200.1	Wheat	cytosol	45.16	48.04
TraesCS5A01G324500.1	Wheat	cytosol	43.78	47.98
TraesCS5B01G325100.1	Wheat	cytosol	44.7	47.55
TraesCS5A01G324300.1	Wheat	cytosol	43.78	46.57
TraesCS5B01G325300.1	Wheat	cytosol	43.32	46.53
TraesCS5D01G331400.1	Wheat	cytosol, plastid	42.86	46.04
PGSC0003DMT400010101	Potato	cytosol	45.16	44.75
VIT_02s0241g00100.t01	Wine grape	cytosol	44.24	44.65
Solyc08g079480.2.1	Tomato	cytosol	44.7	44.29
AT2G45360.1	Thale cress	cytosol	43.32	43.72
Zm00001d018712_P001	Maize	cytosol	46.08	43.1
VIT_15s0048g00700.t01	Wine grape	cytosol	42.86	43.06
CDY57106	Canola	cytosol	43.78	42.6
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	52.07	42.16
KRH57302	Soybean	cytosol	41.94	42.13
KRH04025	Soybean	cytosol	42.4	42.01
Bra007560.1-P	Field mustard	cytosol	40.55	40.55
Bra040314.1-P	Field mustard	cytosol	41.47	40.36
CDY37036	Canola	cytosol	41.47	40.36
CDY52349	Canola	cytosol	40.09	40.09
CDX71783	Canola	cytosol	40.09	39.91
CDX74734	Canola	cytosol	40.55	39.82
Bra004904.1-P	Field mustard	cytosol	40.55	39.82
Bra007557.1-P	Field mustard	plastid	40.09	39.73
CDY41141	Canola	cytosol	40.09	39.73
EER97893	Sorghum	cytosol	45.16	39.68
KRH28022	Soybean	cytosol	37.33	39.13
GSMUA_Achr11P...	Banana	cytosol	41.01	38.2
AT3G60780.1	Thale cress	plastid	37.79	37.61
KRH76237	Soybean	cytosol	37.79	36.77
CDY21045	Canola	cytosol	36.41	36.24
Solyc10g018200.1.1	Tomato	cytosol	37.33	36.16
AT1G12320.1	Thale cress	cytosol	35.02	35.85
Bra016780.1-P	Field mustard	cytosol	35.94	35.78
Bra026975.1-P	Field mustard	cytosol	35.94	35.78
CDY26557	Canola	cytosol	35.94	35.78
Solyc08g007480.1.1	Tomato	cytosol	35.94	35.78
CDY15992	Canola	cytosol	35.94	35.78
Bra019758.1-P	Field mustard	cytosol	35.94	35.45
CDX98072	Canola	cytosol	35.94	35.45
CDY31260	Canola	cytosol	35.48	35.32
KRH65304	Soybean	cytosol	37.33	34.91
PGSC0003DMT400032504	Potato	cytosol	35.02	34.86
KRH77415	Soybean	plastid	41.01	34.63
CDY30071	Canola	cytosol	32.26	33.98
AT1G62840.1	Thale cress	cytosol	35.02	33.93
PGSC0003DMT400024806	Potato	cytosol	29.49	33.86
CDY25700	Canola	cytosol	34.56	33.63
CDY51807	Canola	cytosol	18.89	33.61
Bra034527.1-P	Field mustard	cytosol	34.1	33.04
CDY59673	Canola	cytosol	34.1	33.04
CDY34691	Canola	cytosol	33.64	32.59
GSMUA_Achr5P18780_001	Banana	cytosol	26.73	27.23
GSMUA_Achr8P08470_001	Banana	cytosol	22.58	21.88
GSMUA_Achr6P13950_001	Banana	mitochondrion	24.88	21.86

Protein Annotations

EnsemblPlants:GSMUA_Achr5P18770_001	EnsemblPlants:GSMUA_Achr5T18770_001	EnsemblPlantsGene:GSMUA_Achr5G18770_001	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF2
PFAM:PF07279	SEG:seg	UniParc:UPI000294D8C8	UniProt:M0SZQ6	MapMan:35.2	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G18770_001]

Coordinates

chr5:+:20296621..20297274

Molecular Weight (calculated)

23678.4 Da

IEP (calculated)

7.455

GRAVY (calculated)

-0.161

Length

217 amino acids

Sequence
(BLAST)

001: MKLVWCPDTA LKAYVDAVKA LAERGLEESS VAEMVSAMAG GWRAQLVVEA WARDAGAATG VGLRAAVEHV RGRHVCVVPD EQWAAEYVGA MRRAGESVEA
101: ESVAVGEAEG AMRELEGVDL MVVDCRRRDA GRVLREARPG ERGMVVVCKW AGRQRGGAAG VFRAGTRVVR ATYLPLEGGV EVFHVGVGKG PSLGDVRSRW
201: IRYVDDYNNE EHLFRRW

Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)

001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.