CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004904.1-P	Field mustard	cytosol	99.55	99.55
CDY37036	Canola	cytosol	87.78	87.0
AT2G45360.1	Thale cress	cytosol	82.35	84.65
CDY57106	Canola	cytosol	80.54	79.82
CDY51807	Canola	cytosol	43.89	79.51
CDY41141	Canola	cytosol	62.44	63.01
CDX71783	Canola	cytosol	61.99	62.84
CDY52349	Canola	cytosol	61.09	62.21
VIT_15s0048g00700.t01	Wine grape	cytosol	54.75	56.02
KRH76237	Soybean	cytosol	54.3	53.81
KRH65304	Soybean	cytosol	53.85	51.29
Solyc10g018200.1.1	Tomato	cytosol	49.32	48.66
CDX98072	Canola	cytosol	47.06	47.27
CDY15992	Canola	cytosol	46.61	47.25
CDY26557	Canola	cytosol	46.15	46.79
CDY21045	Canola	cytosol	46.15	46.79
CDY31260	Canola	cytosol	45.7	46.33
PGSC0003DMT400024806	Potato	cytosol	39.37	46.03
GSMUA_Achr8P19380_001	Banana	cytosol	43.44	44.24
CDY59673	Canola	cytosol	44.34	43.75
CDY34691	Canola	cytosol	43.89	43.3
CDY30071	Canola	cytosol	39.82	42.72
CDY25700	Canola	cytosol	42.53	42.15
GSMUA_Achr5P18770_001	Banana	cytosol	39.82	40.55
TraesCS5D01G331200.1	Wheat	cytosol	36.65	39.71
TraesCS5A01G324500.1	Wheat	cytosol	35.29	39.39
TraesCS5B01G325100.1	Wheat	cytosol	36.2	39.22
TraesCS5A01G324300.1	Wheat	cytosol	35.75	38.73
HORVU5Hr1G082620.1	Barley	cytosol	35.75	38.73
TraesCS5B01G325300.1	Wheat	cytosol	34.84	38.12
TraesCS5D01G331400.1	Wheat	cytosol, plastid	34.39	37.62
GSMUA_AchrUn_...	Banana	cytosol	37.1	37.61
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	41.18	33.96
Zm00001d018712_P001	Maize	cytosol	35.29	33.62
EER97893	Sorghum	cytosol	37.1	33.2
CDY69766	Canola	cytosol	28.96	26.34
CDY69982	Canola	cytosol	28.96	26.23
CDX87243	Canola	cytosol	28.96	26.23
CDY00273	Canola	cytosol	28.51	25.93
CDY16780	Canola	cytosol	28.51	25.82
GSMUA_Achr11P...	Banana	cytosol	25.34	24.03
CDX86908	Canola	extracellular	26.24	23.02

Protein Annotations

EnsemblPlants:CDX74734	EnsemblPlantsGene:GSBRNA2T00116699001	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF2	PFAM:PF07279
ProteinID:CDX74734	ProteinID:CDX74734.1	SEG:seg	UniParc:UPI0004EEF8A7	MapMan:35.2	:

Description

BnaA05g04800D

Coordinates

chrLK031802:+:374550..375338

Molecular Weight (calculated)

24483.2 Da

IEP (calculated)

9.576

GRAVY (calculated)

-0.255

Length

221 amino acids

Sequence
(BLAST)

001: MKLVWSPESA SDAYIDTVRS CKNYKESGVA EFLSATAAGW NARLIVETWS RGDPVATSVG LAVAAAHTSG RHVCIVQDEQ SKHEYVLAMR GVVTTEATEV
101: VVVRESTENT MEEFPGVEFL VVDSKRREFL RTLRSAKLSN KGAVLVCKNA AQRAISRFKW QDVLKGETRV ARSVFLPVGN GLDIAHVGAI GGLQRGESRK
201: HPSRWIRHVD HLSGEEHLFR R

Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)

001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.