Factsheet for Bra004904.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74734	Canola	cytosol	99.55	99.55
Bra040314.1-P	Field mustard	cytosol	87.33	86.55
AT2G45360.1	Thale cress	cytosol	82.35	84.65
Bra007560.1-P	Field mustard	cytosol	61.09	62.21
Bra007557.1-P	Field mustard	plastid	61.54	62.1
VIT_15s0048g00700.t01	Wine grape	cytosol	54.75	56.02
KRH76237	Soybean	cytosol	54.3	53.81
KRH65304	Soybean	cytosol	53.85	51.29
Solyc10g018200.1.1	Tomato	cytosol	49.32	48.66
Bra019758.1-P	Field mustard	cytosol	47.06	47.27
Bra026975.1-P	Field mustard	cytosol	46.15	46.79
PGSC0003DMT400024806	Potato	cytosol	39.37	46.03
Bra016780.1-P	Field mustard	cytosol	45.25	45.87
GSMUA_Achr8P19380_001	Banana	cytosol	43.44	44.24
Bra034527.1-P	Field mustard	cytosol	44.34	43.75
GSMUA_Achr5P18770_001	Banana	cytosol	39.82	40.55
TraesCS5D01G331200.1	Wheat	cytosol	36.65	39.71
TraesCS5A01G324500.1	Wheat	cytosol	35.29	39.39
TraesCS5B01G325100.1	Wheat	cytosol	36.2	39.22
HORVU5Hr1G082620.1	Barley	cytosol	35.75	38.73
TraesCS5A01G324300.1	Wheat	cytosol	35.75	38.73
TraesCS5B01G325300.1	Wheat	cytosol	34.84	38.12
TraesCS5D01G331400.1	Wheat	cytosol, plastid	34.39	37.62
GSMUA_AchrUn_...	Banana	cytosol	37.1	37.61
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	41.18	33.96
Zm00001d018712_P001	Maize	cytosol	35.29	33.62
EER97893	Sorghum	cytosol	37.1	33.2
Bra029269.1-P	Field mustard	cytosol	28.96	26.12
Bra010072.1-P	Field mustard	cytosol	28.51	25.93
Bra035898.1-P	Field mustard	cytosol	28.51	25.82
GSMUA_Achr11P...	Banana	cytosol	25.34	24.03

Protein Annotations

EnsemblPlants:Bra004904.1	EnsemblPlants:Bra004904.1-P	EnsemblPlantsGene:Bra004904	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF2
PFAM:PF07279	SEG:seg	UniParc:UPI0002547F19	UniProt:M4CL18	MapMan:35.2	:

Description

AT2G45360 (E=3e-092) | unknown protein

Coordinates

chrA05:+:2408462..2409246

Molecular Weight (calculated)

24440.2 Da

IEP (calculated)

9.238

GRAVY (calculated)

-0.214

Length

221 amino acids

Sequence
(BLAST)

001: MKLVWSPESA SDAYIDTVRS CKNYKESGVA EFLSATAAGW NARLIVETWS RGDPVATSVG LAVAAAHTSG RHVCIVQDEQ SKHEYVLAMR GVVTTEATEV
101: VVVIESTENT MEEFPGVEFL VVDSKRREFL RTLRSAKLSN KGAVLVCKNA AQRAISRFKW QDVLKGETRV ARSVFLPVGN GLDIAHVGAI GGLQRGESRK
201: HPSRWIRHVD HLSGEEHLFR R

Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)

001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.