Factsheet for Bra007557.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41141	Canola	cytosol	99.09	99.09
Bra007560.1-P	Field mustard	cytosol	97.26	98.16
AT3G60780.1	Thale cress	plastid	81.28	81.65
Bra040314.1-P	Field mustard	cytosol	67.58	66.37
Bra004904.1-P	Field mustard	cytosol	62.1	61.54
VIT_15s0048g00700.t01	Wine grape	cytosol	54.34	55.09
KRH76237	Soybean	cytosol	55.25	54.26
KRH65304	Soybean	cytosol	54.79	51.72
Solyc10g018200.1.1	Tomato	cytosol	51.14	50.0
Bra016780.1-P	Field mustard	cytosol	45.21	45.41
Bra019758.1-P	Field mustard	cytosol	45.21	45.0
Bra026975.1-P	Field mustard	cytosol	44.29	44.5
PGSC0003DMT400024806	Potato	cytosol	37.9	43.92
GSMUA_Achr8P19380_001	Banana	cytosol	43.38	43.78
Bra034527.1-P	Field mustard	cytosol	42.01	41.07
GSMUA_Achr5P18770_001	Banana	cytosol	39.73	40.09
TraesCS5D01G331200.1	Wheat	cytosol	35.62	38.24
TraesCS5A01G324500.1	Wheat	cytosol	34.25	37.88
HORVU5Hr1G082620.1	Barley	cytosol	35.16	37.75
TraesCS5B01G325100.1	Wheat	cytosol	35.16	37.75
TraesCS5D01G331400.1	Wheat	cytosol, plastid	34.7	37.62
TraesCS5A01G324300.1	Wheat	cytosol	34.7	37.25
GSMUA_AchrUn_...	Banana	cytosol	36.53	36.7
TraesCS5B01G325300.1	Wheat	cytosol	33.33	36.14
Zm00001d018712_P001	Maize	cytosol	35.62	33.62
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	38.81	31.72
EER97893	Sorghum	cytosol	35.16	31.17
Bra029269.1-P	Field mustard	cytosol	27.4	24.49
Bra010072.1-P	Field mustard	cytosol	26.94	24.28
GSMUA_Achr11P...	Banana	cytosol	25.57	24.03
Bra035898.1-P	Field mustard	cytosol	26.03	23.36

Protein Annotations

EnsemblPlants:Bra007557.1	EnsemblPlants:Bra007557.1-P	EnsemblPlantsGene:Bra007557	Gene3D:3.40.50.150	InterPro:DUF1442	PANTHER:PTHR33593
PANTHER:PTHR33593:SF2	PFAM:PF07279	UniParc:UPI00025428CC	UniProt:M4CTL3	MapMan:35.2	:

Description

AT3G60780 (E=3e-102) | unknown protein

Coordinates

chrA09:+:29783561..29784449

Molecular Weight (calculated)

24093.0 Da

IEP (calculated)

10.105

GRAVY (calculated)

-0.163

Length

219 amino acids

Sequence
(BLAST)

001: MKLVWSPETA SNSYIHTVRT CISYKESSVA EYLSATAAGW NTRLIVETWK RGDPIATSVG LAVAAIHTRG RHICIVPDEE SRLEYETVMK RAVVSEATEI
101: VVGDSVEDVV DRLSGVDFLV VDSKRGEYVK ALGLANTSKM GAVLVCKNAT QKSIPGFKWH RVLRRGTRVV RSVFLPVGRG LDIAHVGASG GGGDLKKVHS
201: RWIKHVDPRS GEEHLFKRK

Best Arabidopsis Sequence Match ( AT3G60780.1 )
(BLAST)

001: MRLVWSPETA SNAYIHTVRS CKSYRDSSVA EFLSATAAGW NTRLIVETWS RGDPIATSVG LAVAAIHTCG RHVCIVPDEE SRSEYEAVMR GAVTSDSTEV
101: MVLDSAEDVV ERISGVDFMV VDSKRHEFVN ALGLAKTSKM GAVLVCKNAT LKSIPGFKWQ GLLRRGTRVV RSVFLPVGRG LEIVHVGASG GGNGLRKIPS
201: RWIKHIDPRS GEEHLFKR

Arabidopsis Description

Uncharacterized protein T4C21_190 [Source:UniProtKB/TrEMBL;Acc:Q9LZY5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.