CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
golgi 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG90091
KRH17593

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45360.1	KRG90091	AT1G64630.1	21798944
AT2G45360.1	KRH17593	AT1G64630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76237	Soybean	cytosol	86.21	89.69
VIT_15s0048g00700.t01	Wine grape	cytosol	56.9	61.11
AT2G45360.1	Thale cress	cytosol	53.88	58.14
Bra007560.1-P	Field mustard	cytosol	52.16	55.76
CDX71783	Canola	cytosol	52.16	55.5
CDY52349	Canola	cytosol	51.72	55.3
CDY41141	Canola	cytosol	52.16	55.25
KRH04025	Soybean	cytosol	52.16	55.25
Bra007557.1-P	Field mustard	plastid	51.72	54.79
Bra004904.1-P	Field mustard	cytosol	51.29	53.85
CDX74734	Canola	cytosol	51.29	53.85
CDY57106	Canola	cytosol	51.72	53.81
KRH57302	Soybean	cytosol	50.0	53.7
Bra040314.1-P	Field mustard	cytosol	51.29	53.36
CDY37036	Canola	cytosol	51.29	53.36
AT3G60780.1	Thale cress	plastid	50.0	53.21
KRH28022	Soybean	cytosol	47.41	53.14
CDY51807	Canola	cytosol	25.86	49.18
KRH77415	Soybean	plastid	50.0	45.14
Solyc10g018200.1.1	Tomato	cytosol	42.67	44.2
PGSC0003DMT400024806	Potato	cytosol	34.91	42.86
GSMUA_Achr8P19380_001	Banana	cytosol	38.36	41.01
TraesCS5D01G331200.1	Wheat	cytosol	34.91	39.71
TraesCS5B01G325100.1	Wheat	cytosol	34.48	39.22
HORVU5Hr1G082620.1	Barley	cytosol	34.05	38.73
TraesCS5A01G324300.1	Wheat	cytosol	33.62	38.24
TraesCS5D01G331400.1	Wheat	cytosol, plastid	33.19	38.12
TraesCS5A01G324500.1	Wheat	cytosol	32.33	37.88
TraesCS5B01G325300.1	Wheat	cytosol	32.76	37.62
GSMUA_Achr5P18770_001	Banana	cytosol	34.91	37.33
GSMUA_AchrUn_...	Banana	cytosol	33.62	35.78
Zm00001d018712_P001	Maize	cytosol	32.76	32.76
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	37.07	32.09
EER97893	Sorghum	cytosol	33.62	31.58
KRH65296	Soybean	cytosol	29.31	31.05
KRH38734	Soybean	cytosol, plastid	28.88	30.18
KRG92460	Soybean	cytosol, plastid	27.59	28.7
KRH47906	Soybean	nucleus	28.45	27.73
KRH34338	Soybean	cytosol, plastid	26.72	27.68
KRH06462	Soybean	vacuole	23.28	27.55
KRH09236	Soybean	cytosol	20.69	26.52
KRG97184	Soybean	cytosol	15.52	26.09
GSMUA_Achr11P...	Banana	cytosol	25.86	25.75

Protein Annotations

EMBL:ACUP02001327	EnsemblPlants:KRH65304	EnsemblPlantsGene:GLYMA_03G026600	EntrezGene:100794419	Gene3D:3.40.50.150	InterPro:DUF1442
PANTHER:PTHR33593	PANTHER:PTHR33593:SF7	PFAM:PF07279	ProteinID:KRH65304	ProteinID:KRH65304.1	SEG:seg
UniParc:UPI000233A7C4	UniProt:I1JKN7	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:2917050..2918737

Molecular Weight (calculated)

25092.3 Da

IEP (calculated)

9.736

GRAVY (calculated)

-0.071

Length

232 amino acids

Sequence
(BLAST)

001: MKLVWSPESA LQAYIDTVKS CEKFKETGVP ELLSAMAAGW NTKFIVESWS YGGPIAASVG LAVAARNTGA RHVCIVPDER SKMQYITALA EMGVSPPPEV
101: VAGEAEAAVA RLAGLDFLVV DCKRKEFARV LRVAEVGPKG AVLACKNAWQ RNFCGGFRWN MVLQKGVRIV RSVFLPVGKG LDIAYIGSSR SGVSPAPPPP
201: PATTSKTRPS RWIKHIDQQS GEEHLFRDSS SH

Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)

001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.