Factsheet for TraesCS5A01G324500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G331400.1	Wheat	cytosol, plastid	89.9	88.12
TraesCS5B01G325300.1	Wheat	cytosol	89.39	87.62
TraesCS5A01G324300.1	Wheat	cytosol	85.35	82.84
HORVU5Hr1G082620.1	Barley	cytosol	85.35	82.84
Zm00001d018712_P001	Maize	cytosol	60.1	51.29
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	68.69	50.75
GSMUA_Achr8P19380_001	Banana	cytosol	52.53	47.93
EER97893	Sorghum	cytosol	59.6	47.77
GSMUA_AchrUn_...	Banana	cytosol	51.52	46.79
GSMUA_Achr5P18770_001	Banana	cytosol	47.98	43.78
CDY51807	Canola	cytosol	24.24	39.34
AT2G45360.1	Thale cress	cytosol	41.92	38.6
CDY57106	Canola	cytosol	41.92	37.22
CDY37036	Canola	cytosol	41.92	37.22
Bra040314.1-P	Field mustard	cytosol	41.92	37.22
VIT_02s0241g00100.t01	Wine grape	cytosol	39.9	36.74
VIT_15s0048g00700.t01	Wine grape	cytosol	39.9	36.57
Bra004904.1-P	Field mustard	cytosol	39.39	35.29
CDX74734	Canola	cytosol	39.39	35.29
KRH57302	Soybean	cytosol	38.38	35.19
PGSC0003DMT400010101	Potato	cytosol	38.89	35.16
Bra007560.1-P	Field mustard	cytosol	38.38	35.02
CDY41141	Canola	cytosol	38.38	34.7
Solyc08g079480.2.1	Tomato	cytosol	38.38	34.7
CDY52349	Canola	cytosol	37.88	34.56
CDX71783	Canola	cytosol	37.88	34.4
KRH04025	Soybean	cytosol	37.88	34.25
Bra007557.1-P	Field mustard	plastid	37.88	34.25
KRH28022	Soybean	cytosol	35.35	33.82
CDX98072	Canola	cytosol	36.87	33.18
Bra019758.1-P	Field mustard	cytosol	36.87	33.18
AT3G60780.1	Thale cress	plastid	36.36	33.03
CDY21045	Canola	cytosol	36.36	33.03
Bra016780.1-P	Field mustard	cytosol	36.36	33.03
CDY15992	Canola	cytosol	35.86	32.57
AT1G12320.1	Thale cress	cytosol	34.85	32.55
KRH65304	Soybean	cytosol	37.88	32.33
AT1G62840.1	Thale cress	cytosol	36.36	32.14
Bra026975.1-P	Field mustard	cytosol	35.35	32.11
CDY26557	Canola	cytosol	35.35	32.11
KRH76237	Soybean	cytosol	35.86	31.84
Bra034527.1-P	Field mustard	cytosol	35.35	31.25
CDY59673	Canola	cytosol	35.35	31.25
CDY34691	Canola	cytosol	34.85	30.8
Solyc08g007480.1.1	Tomato	cytosol	33.84	30.73
CDY31260	Canola	cytosol	33.84	30.73
Solyc10g018200.1.1	Tomato	cytosol	34.34	30.36
PGSC0003DMT400032504	Potato	cytosol	33.33	30.28
CDY25700	Canola	cytosol	33.33	29.6
KRH77415	Soybean	plastid	37.37	28.79
CDY30071	Canola	cytosol	29.8	28.64
PGSC0003DMT400024806	Potato	cytosol	26.26	27.51
GSMUA_Achr11P...	Banana	cytosol	27.78	23.61

Protein Annotations

EnsemblPlants:TraesCS5A01G324500.1	EnsemblPlantsGene:TraesCS5A01G324500	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF2	PFAM:PF07279
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:535674325..535674921

Molecular Weight (calculated)

20964.1 Da

IEP (calculated)

9.341

GRAVY (calculated)

-0.065

Length

198 amino acids

Sequence
(BLAST)

001: MKLVWCPETA SQAFIAGVSA LSDSEHGPAG SAGVAELVSA MVGGWNAQLV VDAPEVSATT SLALAAAAQR TGGRYARVLA DADRAMEELE GVDFLVVDAR
101: RRDAAAVLAA ARPGARGMVV VRHGDGRRRG TKALEASMAA GTRIVRSVYL PIDTGVEVLH VGLGKGPSIQ CRRSPRVSSR WIRHVDQETG EEHLFRRQ

Best Arabidopsis Sequence Match ( AT5G62280.1 )
(BLAST)

001: MAFWSAENAT KAYLSTLKTD QRTKEPNVAE FISALAAGNS ARKIAVACAG AANADILVAL IAAANQTRGQ VVCVLRGIEE LIISQKMLEP SEIHQIQFVV
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA

Arabidopsis Description

At5g62280 [Source:UniProtKB/TrEMBL;Acc:Q9LVA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.