Factsheet for Bra034527.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59673	Canola	cytosol	99.55	99.55
AT1G62840.1	Thale cress	cytosol	85.71	85.71
Bra026975.1-P	Field mustard	cytosol	66.07	67.89
Bra016780.1-P	Field mustard	cytosol	64.29	66.06
Bra019758.1-P	Field mustard	cytosol	63.39	64.55
Solyc08g007480.1.1	Tomato	cytosol	45.09	46.33
PGSC0003DMT400032504	Potato	cytosol	44.2	45.41
PGSC0003DMT400010101	Potato	cytosol	44.2	45.21
Solyc08g079480.2.1	Tomato	cytosol	43.75	44.75
Bra040314.1-P	Field mustard	cytosol	44.2	44.39
Bra004904.1-P	Field mustard	cytosol	43.75	44.34
Bra007560.1-P	Field mustard	cytosol	41.52	42.86
Bra007557.1-P	Field mustard	plastid	41.07	42.01
GSMUA_Achr8P19380_001	Banana	cytosol	35.71	36.87
TraesCS5A01G324500.1	Wheat	cytosol	31.25	35.35
TraesCS5B01G325300.1	Wheat	cytosol	31.7	35.15
HORVU5Hr1G082620.1	Barley	cytosol	31.25	34.31
TraesCS5B01G325100.1	Wheat	cytosol	31.25	34.31
TraesCS5D01G331200.1	Wheat	cytosol	31.25	34.31
TraesCS5D01G331400.1	Wheat	cytosol, plastid	30.8	34.16
GSMUA_Achr5P18770_001	Banana	cytosol	33.04	34.1
TraesCS5A01G324300.1	Wheat	cytosol	30.8	33.82
Zm00001d018712_P001	Maize	cytosol	34.82	33.62
GSMUA_AchrUn_...	Banana	cytosol	32.14	33.03
EER97893	Sorghum	cytosol	34.82	31.58
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	34.82	29.1
GSMUA_Achr11P...	Banana	cytosol	24.55	23.61
Bra010072.1-P	Field mustard	cytosol	24.11	22.22
Bra029269.1-P	Field mustard	cytosol	23.66	21.63
Bra035898.1-P	Field mustard	cytosol	22.77	20.9

Protein Annotations

EnsemblPlants:Bra034527.1	EnsemblPlants:Bra034527.1-P	EnsemblPlantsGene:Bra034527	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF2
PFAM:PF07279	UniParc:UPI000253E590	UniProt:M4F0D3	MapMan:35.2	:	:

Description

AT1G62840 (E=3e-111) | unknown protein

Coordinates

chrScaffold000096:+:913873..914723

Molecular Weight (calculated)

24609.2 Da

IEP (calculated)

6.667

GRAVY (calculated)

-0.250

Length

224 amino acids

Sequence
(BLAST)

001: MKLIWSPETA SKAYIDTVKS CEKLGTPGPA ELVAAMAAGW NATLIVETWS EGETIAISVG LNVASQHTNA RHMCIVPNAI SEAAYLEAMT QQYCSTLPET
101: IIMNEEEEGN SENTMQMLQG IDFLVIDWDQ KDFAANVLRN AAFGSRGAVV VCRSGYRRST SCFSWTKAFS DRNVVRTVTL PVSGGLEIAH VAAARSSGKN
201: DNNNKRKWIK HIDQRSGEEH VIRK

Best Arabidopsis Sequence Match ( AT1G62840.1 )
(BLAST)

001: MKLIWSPETA SKAYIDTVKS CENLGTPGAA ELVAAMAAGW NANLIVETWS EGETIAISVG LNIASRHTNG RHICIVPNAR SQTAYLQAMA EQSCSNLPET
101: IIMNEEGEEL EHTMQTLQGI DFLVVDWDQK DFAANVLRNA VFGSRGAVVV CRSGYRRSTS CFSWTKAFSD RNVVRTVTLP VSGGLEIAHV AAARSSGKSD
201: NNSNKRKWIK HFDQRSGEEH VIRK

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:Q9SI67]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.