Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34691 | Canola | cytosol | 87.05 | 87.05 |
| CDY59673 | Canola | cytosol | 86.16 | 86.16 |
| Bra034527.1-P | Field mustard | cytosol | 85.71 | 85.71 |
| CDY25700 | Canola | cytosol | 79.02 | 79.37 |
| AT1G12320.1 | Thale cress | cytosol | 61.16 | 64.62 |
| AT2G45360.1 | Thale cress | cytosol | 47.32 | 49.3 |
| Solyc08g007480.1.1 | Tomato | cytosol | 47.32 | 48.62 |
| PGSC0003DMT400010101 | Potato | cytosol | 47.32 | 48.4 |
| PGSC0003DMT400032504 | Potato | cytosol | 46.88 | 48.17 |
| Solyc08g079480.2.1 | Tomato | cytosol | 46.88 | 47.95 |
| AT3G60780.1 | Thale cress | plastid | 42.86 | 44.04 |
| GSMUA_Achr8P19380_001 | Banana | cytosol | 37.05 | 38.25 |
| TraesCS5A01G324500.1 | Wheat | cytosol | 32.14 | 36.36 |
| HORVU5Hr1G082620.1 | Barley | cytosol | 33.04 | 36.27 |
| TraesCS5D01G331200.1 | Wheat | cytosol | 33.04 | 36.27 |
| TraesCS5B01G325100.1 | Wheat | cytosol | 33.04 | 36.27 |
| TraesCS5B01G325300.1 | Wheat | cytosol | 32.59 | 36.14 |
| TraesCS5A01G324300.1 | Wheat | cytosol | 32.59 | 35.78 |
| GSMUA_AchrUn_... | Banana | cytosol | 34.38 | 35.32 |
| TraesCS5D01G331400.1 | Wheat | cytosol, plastid | 31.7 | 35.15 |
| GSMUA_Achr5P18770_001 | Banana | cytosol | 33.93 | 35.02 |
| Zm00001d018712_P001 | Maize | cytosol | 35.27 | 34.05 |
| EER97893 | Sorghum | cytosol | 36.16 | 32.79 |
| Os02t0455400-00 | Rice | endoplasmic reticulum, plasma membrane | 36.61 | 30.6 |
| GSMUA_Achr11P... | Banana | cytosol | 26.34 | 25.32 |
| AT5G62280.1 | Thale cress | cytosol | 24.11 | 22.88 |
Protein Annotations
| MapMan:35.2 | EntrezGene:842584 | ProteinID:AAF19540.1 | ProteinID:AEE34011.1 | EMBL:AK175387 | EMBL:AK176638 |
| ArrayExpress:AT1G62840 | EnsemblPlantsGene:AT1G62840 | RefSeq:AT1G62840 | TAIR:AT1G62840 | RefSeq:AT1G62840-TAIR-G | EnsemblPlants:AT1G62840.1 |
| TAIR:AT1G62840.1 | Unigene:At.36215 | EMBL:BT010897 | InterPro:DUF1442 | GO:GO:0003674 | GO:GO:0005575 |
| GO:GO:0008150 | RefSeq:NP_176472.1 | PFAM:PF07279 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF2 | UniProt:Q9SI67 | UniParc:UPI00000A3E13 |
| SEG:seg | : | : | : | : | : |
Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:Q9SI67]
Coordinates
chr1:+:23271416..23272578
Molecular Weight (calculated)
24584.1 Da
IEP (calculated)
7.506
GRAVY (calculated)
-0.262
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLIWSPETA SKAYIDTVKS CENLGTPGAA ELVAAMAAGW NANLIVETWS EGETIAISVG LNIASRHTNG RHICIVPNAR SQTAYLQAMA EQSCSNLPET
101: IIMNEEGEEL EHTMQTLQGI DFLVVDWDQK DFAANVLRNA VFGSRGAVVV CRSGYRRSTS CFSWTKAFSD RNVVRTVTLP VSGGLEIAHV AAARSSGKSD
201: NNSNKRKWIK HFDQRSGEEH VIRK
101: IIMNEEGEEL EHTMQTLQGI DFLVVDWDQK DFAANVLRNA VFGSRGAVVV CRSGYRRSTS CFSWTKAFSD RNVVRTVTLP VSGGLEIAHV AAARSSGKSD
201: NNSNKRKWIK HFDQRSGEEH VIRK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.