Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G325100.1 | Wheat | cytosol | 97.55 | 97.55 |
| TraesCS5A01G324300.1 | Wheat | cytosol | 97.06 | 97.06 |
| HORVU5Hr1G082620.1 | Barley | cytosol | 96.08 | 96.08 |
| TraesCS5D01G331400.1 | Wheat | cytosol, plastid | 86.76 | 87.62 |
| Zm00001d018712_P001 | Maize | cytosol | 61.27 | 53.88 |
| Os02t0455400-00 | Rice | endoplasmic reticulum, plasma membrane | 68.63 | 52.24 |
| GSMUA_Achr8P19380_001 | Banana | cytosol | 53.43 | 50.23 |
| EER97893 | Sorghum | cytosol | 59.31 | 48.99 |
| GSMUA_AchrUn_... | Banana | cytosol | 51.47 | 48.17 |
| GSMUA_Achr5P18770_001 | Banana | cytosol | 48.04 | 45.16 |
| CDY51807 | Canola | cytosol | 25.0 | 41.8 |
| AT2G45360.1 | Thale cress | cytosol | 43.14 | 40.93 |
| VIT_15s0048g00700.t01 | Wine grape | cytosol | 43.14 | 40.74 |
| CDY57106 | Canola | cytosol | 42.65 | 39.01 |
| CDY37036 | Canola | cytosol | 42.65 | 39.01 |
| Bra040314.1-P | Field mustard | cytosol | 42.65 | 39.01 |
| VIT_02s0241g00100.t01 | Wine grape | cytosol | 39.71 | 37.67 |
| KRH57302 | Soybean | cytosol | 39.22 | 37.04 |
| Bra004904.1-P | Field mustard | cytosol | 39.71 | 36.65 |
| CDX74734 | Canola | cytosol | 39.71 | 36.65 |
| PGSC0003DMT400010101 | Potato | cytosol | 39.22 | 36.53 |
| Bra007560.1-P | Field mustard | cytosol | 38.73 | 36.41 |
| KRH04025 | Soybean | cytosol | 38.73 | 36.07 |
| Solyc08g079480.2.1 | Tomato | cytosol | 38.73 | 36.07 |
| CDY41141 | Canola | cytosol | 38.73 | 36.07 |
| CDY52349 | Canola | cytosol | 38.24 | 35.94 |
| CDX71783 | Canola | cytosol | 38.24 | 35.78 |
| Bra007557.1-P | Field mustard | plastid | 38.24 | 35.62 |
| KRH76237 | Soybean | cytosol | 38.73 | 35.43 |
| KRH65304 | Soybean | cytosol | 39.71 | 34.91 |
| AT3G60780.1 | Thale cress | plastid | 37.25 | 34.86 |
| KRH28022 | Soybean | cytosol | 35.29 | 34.78 |
| CDX98072 | Canola | cytosol | 35.78 | 33.18 |
| Bra019758.1-P | Field mustard | cytosol | 35.78 | 33.18 |
| AT1G62840.1 | Thale cress | cytosol | 36.27 | 33.04 |
| AT1G12320.1 | Thale cress | cytosol | 34.31 | 33.02 |
| CDY21045 | Canola | cytosol | 34.8 | 32.57 |
| Bra016780.1-P | Field mustard | cytosol | 34.8 | 32.57 |
| Solyc08g007480.1.1 | Tomato | cytosol | 34.31 | 32.11 |
| CDY15992 | Canola | cytosol | 34.31 | 32.11 |
| Bra026975.1-P | Field mustard | cytosol | 33.82 | 31.65 |
| CDY31260 | Canola | cytosol | 33.82 | 31.65 |
| CDY26557 | Canola | cytosol | 33.82 | 31.65 |
| CDY59673 | Canola | cytosol | 34.31 | 31.25 |
| CDY34691 | Canola | cytosol | 34.31 | 31.25 |
| Solyc10g018200.1.1 | Tomato | cytosol | 34.31 | 31.25 |
| Bra034527.1-P | Field mustard | cytosol | 34.31 | 31.25 |
| PGSC0003DMT400032504 | Potato | cytosol | 33.33 | 31.19 |
| KRH77415 | Soybean | plastid | 37.75 | 29.96 |
| CDY25700 | Canola | cytosol | 32.35 | 29.6 |
| CDY30071 | Canola | cytosol | 29.41 | 29.13 |
| PGSC0003DMT400024806 | Potato | cytosol | 26.47 | 28.57 |
| GSMUA_Achr11P... | Banana | cytosol | 26.47 | 23.18 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G331200.1 | EnsemblPlantsGene:TraesCS5D01G331200 | InterPro:DUF1442 | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF2 | PFAM:PF07279 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:422420218..422420832
Molecular Weight (calculated)
21452.6 Da
IEP (calculated)
8.768
GRAVY (calculated)
-0.115
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLVWCPETA SQAFIAGVSA LSDAEHGPAG SAGVAELVSA MVGGWNAQLV VEAPEVSAPD SATMSLALAA AAGRTGGRYA RVLPDEDADR AMAELEGVDF
101: LVVDARRRDG AAVLAAARPG PRGMVVVRHG DERRPGTKAL EASMAAGTRV VRSVYLPVDK GVEVLHVGVG KGPSLQCRRS RSASSRWIRH VDHKTGEEHL
201: FRRP
101: LVVDARRRDG AAVLAAARPG PRGMVVVRHG DERRPGTKAL EASMAAGTRV VRSVYLPVDK GVEVLHVGVG KGPSLQCRRS RSASSRWIRH VDHKTGEEHL
201: FRRP
001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.