CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 2
plastid 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018712_P001	Maize	cytosol	59.92	63.79
TraesCS5B01G325300.1	Wheat	cytosol	49.39	60.4
TraesCS5A01G324500.1	Wheat	cytosol	47.77	59.6
TraesCS5D01G331200.1	Wheat	cytosol	48.99	59.31
HORVU5Hr1G082620.1	Barley	cytosol	48.58	58.82
TraesCS5A01G324300.1	Wheat	cytosol	48.58	58.82
TraesCS5B01G325100.1	Wheat	cytosol	48.58	58.82
TraesCS5D01G331400.1	Wheat	cytosol, plastid	47.77	58.42
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	54.66	50.37
GSMUA_Achr8P19380_001	Banana	cytosol	42.51	48.39
GSMUA_AchrUn_...	Banana	cytosol	40.89	46.33
GSMUA_Achr5P18770_001	Banana	cytosol	39.68	45.16
AT2G45360.1	Thale cress	cytosol	35.22	40.47
VIT_15s0048g00700.t01	Wine grape	cytosol	35.22	40.28
CDY51807	Canola	cytosol	19.03	38.52
VIT_02s0241g00100.t01	Wine grape	cytosol	33.2	38.14
CDY57106	Canola	cytosol	34.41	38.12
CDY37036	Canola	cytosol	34.01	37.67
Bra040314.1-P	Field mustard	cytosol	34.01	37.67
CDX74734	Canola	cytosol	33.2	37.1
Bra004904.1-P	Field mustard	cytosol	33.2	37.1
AT1G12320.1	Thale cress	cytosol	31.17	36.32
AT1G62840.1	Thale cress	cytosol	32.79	36.16
Solyc08g079480.2.1	Tomato	cytosol	31.98	36.07
PGSC0003DMT400010101	Potato	cytosol	31.98	36.07
KRH57302	Soybean	cytosol	31.17	35.65
CDY41141	Canola	cytosol	31.58	35.62
CDX71783	Canola	cytosol	31.17	35.32
CDY34691	Canola	cytosol	31.98	35.27
Bra007557.1-P	Field mustard	plastid	31.17	35.16
Bra007560.1-P	Field mustard	cytosol	30.77	35.02
Bra019758.1-P	Field mustard	cytosol	31.17	35.0
CDX98072	Canola	cytosol	31.17	35.0
AT3G60780.1	Thale cress	plastid	30.77	34.86
CDY15992	Canola	cytosol	30.77	34.86
CDY59673	Canola	cytosol	31.58	34.82
Bra034527.1-P	Field mustard	cytosol	31.58	34.82
CDY52349	Canola	cytosol	30.36	34.56
Bra026975.1-P	Field mustard	cytosol	30.36	34.4
CDY26557	Canola	cytosol	30.36	34.4
Solyc08g007480.1.1	Tomato	cytosol	29.96	33.95
KRH04025	Soybean	cytosol	29.96	33.79
KRH76237	Soybean	cytosol	30.36	33.63
KRH65304	Soybean	cytosol	31.58	33.62
CDY21045	Canola	cytosol	29.55	33.49
Bra016780.1-P	Field mustard	cytosol	29.55	33.49
CDY31260	Canola	cytosol	29.55	33.49
Solyc10g018200.1.1	Tomato	cytosol	30.36	33.48
CDY25700	Canola	cytosol	29.55	32.74
PGSC0003DMT400032504	Potato	cytosol	28.74	32.57
CDY30071	Canola	cytosol	27.13	32.52
KRH28022	Soybean	cytosol	27.13	32.37
PGSC0003DMT400024806	Potato	cytosol	22.67	29.63
KRH77415	Soybean	plastid	29.96	28.79
GSMUA_Achr11P...	Banana	cytosol	24.7	26.18

Protein Annotations

EnsemblPlants:EER97893	EnsemblPlantsGene:SORBI_3002G017800	EntrezGene:8084286	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF2
PFAM:PF07279	ProteinID:EER97893	ProteinID:EER97893.1	RefSeq:XP_002461372.1	SEG:seg	UniParc:UPI0001A837E8
UniProt:C5X828	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:1598017..1600220

Molecular Weight (calculated)

25486.2 Da

IEP (calculated)

11.155

GRAVY (calculated)

-0.149

Length

247 amino acids

Sequence
(BLAST)

001: MKLVWCPDTA SKAYIDGVRA IANVDSADAS PELAELLAAM AGGWNARLIV DAPDSASSTS TTTSLALAAA ARRTGGRYAR LDVVDDAPAP PTEDEATTNS
101: GSGSGSGSSS SSFSAAAATE AAMARLEGVD LLVLDARRRD AAVVLRAARP GPRGMVVVVR HGGGGVRRRA AAAPPWWGML AAGTRVVRAA YLPIGAGGVE
201: VLHVGVGKGP SLLPTTQHSR RPSGGGRGRW IRHVNHRTGE EHVFRRQ

Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)

001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.