Factsheet for PGSC0003DMT400010101

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g079480.2.1	Tomato	cytosol	97.26	97.26
PGSC0003DMT400032504	Potato	cytosol	71.69	72.02
PGSC0003DMT400024806	Potato	cytosol	42.92	49.74
CDY15992	Canola	cytosol	48.86	49.08
AT1G12320.1	Thale cress	cytosol	47.03	48.58
Bra019758.1-P	Field mustard	cytosol	48.4	48.18
CDX98072	Canola	cytosol	48.4	48.18
Bra026975.1-P	Field mustard	cytosol	47.95	48.17
CDY26557	Canola	cytosol	47.95	48.17
Bra016780.1-P	Field mustard	cytosol	47.49	47.71
CDY21045	Canola	cytosol	47.49	47.71
AT1G62840.1	Thale cress	cytosol	48.4	47.32
GSMUA_Achr8P19380_001	Banana	cytosol	46.58	47.0
CDY31260	Canola	cytosol	46.12	46.33
GSMUA_Achr5P18770_001	Banana	cytosol	44.75	45.16
CDY30071	Canola	cytosol	42.47	45.15
GSMUA_AchrUn_...	Banana	cytosol	44.75	44.95
CDY59673	Canola	cytosol	45.21	44.2
Bra034527.1-P	Field mustard	cytosol	45.21	44.2
CDY34691	Canola	cytosol	45.21	44.2
CDY25700	Canola	cytosol	44.75	43.95
TraesCS5D01G331200.1	Wheat	cytosol	36.53	39.22
TraesCS5A01G324500.1	Wheat	cytosol	35.16	38.89
TraesCS5B01G325100.1	Wheat	cytosol	36.07	38.73
TraesCS5D01G331400.1	Wheat	cytosol, plastid	35.62	38.61
HORVU5Hr1G082620.1	Barley	cytosol	35.62	38.24
TraesCS5A01G324300.1	Wheat	cytosol	35.16	37.75
TraesCS5B01G325300.1	Wheat	cytosol	34.25	37.13
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	43.84	35.82
Zm00001d018712_P001	Maize	cytosol	35.62	33.62
EER97893	Sorghum	cytosol	36.07	31.98
PGSC0003DMT400072045	Potato	extracellular	28.77	29.58
PGSC0003DMT400059243	Potato	cytosol	28.31	28.97
PGSC0003DMT400059241	Potato	cytosol, plastid	26.48	26.85
PGSC0003DMT400000636	Potato	cytosol	28.77	25.0
GSMUA_Achr11P...	Banana	cytosol	26.48	24.89
PGSC0003DMT400066768	Potato	extracellular	20.09	23.91

Protein Annotations

EnsemblPlants:PGSC0003DMT400010101	EnsemblPlantsGene:PGSC0003DMG400003957	EntrezGene:102580155	Gene3D:3.40.50.150	InterPro:DUF1442	PANTHER:PTHR33593
PANTHER:PTHR33593:SF2	PFAM:PF07279	PGSC:PGSC0003DMG400003957	RefSeq:XP_006363733.1	SEG:seg	UniParc:UPI000296B8B6
UniProt:M0ZXH2	MapMan:35.2	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400003957]

Coordinates

chr8:+:53176587..53177697

Molecular Weight (calculated)

23811.7 Da

IEP (calculated)

7.995

GRAVY (calculated)

-0.142

Length

219 amino acids

Sequence
(BLAST)

001: MKLVWSPEKA SKAYIDTVKS CEIFQESSVA EMISAMAAGW DAQMIVETWS RGGVMATSIG LAVANHHTGG RHICVVPDED SRTEYVEAME KAGMSPEVVI
101: GEPEEAMDGL MGIDFLVVDC RRNDFGRILG VAKLGHRGAV LICKNASSRI ASDFRWRSVL DGKSRIVRSV FLPVGKGLDI AHVGATVKGG GKKGGSGKTE
201: SRWIRHFDRD SGEEFVIRK

Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)

001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.