Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016780.1-P | Field mustard | cytosol | 97.25 | 97.25 |
| CDY31260 | Canola | cytosol | 94.04 | 94.04 |
| CDY15992 | Canola | cytosol | 89.45 | 89.45 |
| CDY26557 | Canola | cytosol | 88.53 | 88.53 |
| AT1G12320.1 | Thale cress | cytosol | 77.98 | 80.19 |
| CDX98072 | Canola | cytosol | 80.28 | 79.55 |
| CDY30071 | Canola | cytosol | 72.02 | 76.21 |
| CDY34691 | Canola | cytosol | 67.43 | 65.62 |
| CDY59673 | Canola | cytosol | 66.97 | 65.18 |
| CDY25700 | Canola | cytosol | 63.76 | 62.33 |
| PGSC0003DMT400010101 | Potato | cytosol | 47.71 | 47.49 |
| Solyc08g007480.1.1 | Tomato | cytosol | 47.25 | 47.25 |
| Solyc08g079480.2.1 | Tomato | cytosol | 47.25 | 47.03 |
| CDX74734 | Canola | cytosol | 46.79 | 46.15 |
| CDY41141 | Canola | cytosol | 46.33 | 46.12 |
| PGSC0003DMT400032504 | Potato | cytosol | 45.87 | 45.87 |
| CDX71783 | Canola | cytosol | 45.87 | 45.87 |
| CDY52349 | Canola | cytosol | 45.41 | 45.62 |
| CDY37036 | Canola | cytosol | 46.33 | 45.29 |
| CDY57106 | Canola | cytosol | 45.41 | 44.39 |
| GSMUA_Achr8P19380_001 | Banana | cytosol | 39.45 | 39.63 |
| CDY51807 | Canola | cytosol | 22.02 | 39.34 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.7 | 36.7 |
| GSMUA_Achr5P18770_001 | Banana | cytosol | 36.24 | 36.41 |
| TraesCS5A01G324500.1 | Wheat | cytosol | 33.03 | 36.36 |
| TraesCS5B01G325300.1 | Wheat | cytosol | 33.03 | 35.64 |
| TraesCS5D01G331400.1 | Wheat | cytosol, plastid | 32.57 | 35.15 |
| HORVU5Hr1G082620.1 | Barley | cytosol | 32.57 | 34.8 |
| TraesCS5B01G325100.1 | Wheat | cytosol | 32.57 | 34.8 |
| TraesCS5D01G331200.1 | Wheat | cytosol | 32.57 | 34.8 |
| TraesCS5A01G324300.1 | Wheat | cytosol | 31.19 | 33.33 |
| Zm00001d018712_P001 | Maize | cytosol | 33.49 | 31.47 |
| EER97893 | Sorghum | cytosol | 33.49 | 29.55 |
| Os02t0455400-00 | Rice | endoplasmic reticulum, plasma membrane | 36.24 | 29.48 |
| GSMUA_Achr11P... | Banana | cytosol | 27.98 | 26.18 |
| CDY69766 | Canola | cytosol | 26.61 | 23.87 |
| CDY00273 | Canola | cytosol | 26.15 | 23.46 |
| CDY69982 | Canola | cytosol | 25.69 | 22.95 |
| CDX87243 | Canola | cytosol | 25.23 | 22.54 |
| CDY16780 | Canola | cytosol | 25.23 | 22.54 |
| CDX86908 | Canola | extracellular | 22.94 | 19.84 |
Protein Annotations
| EnsemblPlants:CDY21045 | EnsemblPlantsGene:GSBRNA2T00015210001 | InterPro:DUF1442 | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF2 | PFAM:PF07279 |
| ProteinID:CDY21045 | ProteinID:CDY21045.1 | UniParc:UPI0004EEAB6A | UniProt:A0A078G3L1 | MapMan:35.2 | : |
Description
BnaA08g24800DBnaA08g24800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3L1]
Coordinates
chrLK032115:+:451456..452276
Molecular Weight (calculated)
23690.0 Da
IEP (calculated)
8.481
GRAVY (calculated)
-0.183
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLVWSPETA SKAYLDTVKS CQNLETPDAA ELVSAMAAGW NAKLIVETWS YGDAIASSVG LNVASQHANA KHICIVQNTL SESSYLQAIQ EASSPLNLPE
101: TIVAEEPQSA MKEIQGIDFL VVDWRNKEFA AGALRNAAFG SRGAVVVCRN GYSRSASGFS WTRALRDRTI VRKVTLPVTG GIEIAHVAAR NSGKTESKKR
201: RWIKHVDQSS GEEHVFSI
101: TIVAEEPQSA MKEIQGIDFL VVDWRNKEFA AGALRNAAFG SRGAVVVCRN GYSRSASGFS WTRALRDRTI VRKVTLPVTG GIEIAHVAAR NSGKTESKKR
201: RWIKHVDQSS GEEHVFSI
001: MKLVWSPETA SKAYIDTVKS CENLETPDAA ELIAAMAAGW NVKLIVETWS EGDAIASSIG LNVASKHANA KHICIVQNSR SESAYLQAIQ ESSSPLNFPE
101: TIVAEEPGKA MKKLQGVDFL VVDWRNKEFA AAALKNAAFG NRGAVVVCRN GYSSLRRVLR DRKVVRTVTL PVTGGIEIAH VAARNSGKSG NNKRRWITHV
201: DQRSGEEHVF SI
101: TIVAEEPGKA MKKLQGVDFL VVDWRNKEFA AAALKNAAFG NRGAVVVCRN GYSSLRRVLR DRKVVRTVTL PVTGGIEIAH VAARNSGKSG NNKRRWITHV
201: DQRSGEEHVF SI
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:Q9LNB3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.