Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010072.1-P | Field mustard | cytosol | 89.68 | 93.0 |
| CDY00273 | Canola | cytosol | 89.68 | 93.0 |
| CDY69766 | Canola | cytosol | 89.29 | 92.59 |
| CDY69982 | Canola | cytosol | 81.75 | 84.43 |
| AT5G62280.1 | Thale cress | cytosol | 78.17 | 83.47 |
| CDX87243 | Canola | cytosol | 79.37 | 81.97 |
| CDY16780 | Canola | cytosol | 78.17 | 80.74 |
| VIT_16s0022g01630.t01 | Wine grape | cytosol, plastid | 46.83 | 53.88 |
| KRG92460 | Soybean | cytosol, plastid | 44.84 | 50.67 |
| KRH34338 | Soybean | cytosol, plastid | 44.44 | 50.0 |
| KRH38734 | Soybean | cytosol, plastid | 43.25 | 49.1 |
| Solyc03g083500.2.1 | Tomato | cytosol | 40.48 | 47.22 |
| PGSC0003DMT400059241 | Potato | cytosol, plastid | 40.08 | 46.76 |
| KRH09236 | Soybean | cytosol | 33.33 | 46.41 |
| GSMUA_Achr5P18780_001 | Banana | cytosol | 35.32 | 41.78 |
| CDY51807 | Canola | cytosol | 13.1 | 27.05 |
| CDY37036 | Canola | cytosol | 23.81 | 26.91 |
| CDX74734 | Canola | cytosol | 23.02 | 26.24 |
| CDY57106 | Canola | cytosol | 23.02 | 26.01 |
| CDY52349 | Canola | cytosol | 21.83 | 25.35 |
| CDX71783 | Canola | cytosol | 21.83 | 25.23 |
| CDY41141 | Canola | cytosol | 21.83 | 25.11 |
| CDY26557 | Canola | cytosol | 20.24 | 23.39 |
| CDX98072 | Canola | cytosol | 20.24 | 23.18 |
| CDY31260 | Canola | cytosol | 19.84 | 22.94 |
| CDY21045 | Canola | cytosol | 19.84 | 22.94 |
| CDY15992 | Canola | cytosol | 19.84 | 22.94 |
| CDY59673 | Canola | cytosol | 19.05 | 21.43 |
| CDY34691 | Canola | cytosol | 19.05 | 21.43 |
| CDY25700 | Canola | cytosol | 17.86 | 20.18 |
| CDY30071 | Canola | cytosol | 16.27 | 19.9 |
Protein Annotations
| EnsemblPlants:CDX86908 | EnsemblPlantsGene:GSBRNA2T00145708001 | Gene3D:3.40.50.150 | InterPro:DUF1442 | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF3 |
| PFAM:PF07279 | ProteinID:CDX86908 | ProteinID:CDX86908.1 | SEG:seg | UniParc:UPI0004EEAF28 | MapMan:35.2 |
Description
BnaC03g51780D
Coordinates
chrLK031848:-:209323..210081
Molecular Weight (calculated)
27626.2 Da
IEP (calculated)
7.955
GRAVY (calculated)
-0.097
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MIWIDAIKIT IVYLVLMSHF DICISILQDQ RTKEPNVAEF ISALAAGNNA RKIVVACAGA ANADIVVALI AAANQTRGQV VCVLRGIEEL IISKKMLEPS
101: EIHQIQFVVG ESNDNTLING HFGEADFVLV DCNLKNHQDI VRKIVNNHEE NARTGGGSGV AVVVGYNAFS RGSSRFGDGR KTQFLPIGEG LLVTRVNDNG
201: SYNQKTMKKN NGYHHHHDDV RKSNWVVKVD KCTGEEHVFR VRAPRGEAII GA
101: EIHQIQFVVG ESNDNTLING HFGEADFVLV DCNLKNHQDI VRKIVNNHEE NARTGGGSGV AVVVGYNAFS RGSSRFGDGR KTQFLPIGEG LLVTRVNDNG
201: SYNQKTMKKN NGYHHHHDDV RKSNWVVKVD KCTGEEHVFR VRAPRGEAII GA
001: MAFWSAENAT KAYLSTLKTD QRTKEPNVAE FISALAAGNS ARKIAVACAG AANADILVAL IAAANQTRGQ VVCVLRGIEE LIISQKMLEP SEIHQIQFVV
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA
Arabidopsis Description
At5g62280 [Source:UniProtKB/TrEMBL;Acc:Q9LVA8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.