Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 1
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_16s0022g01630.t01 | Wine grape | cytosol, plastid | 56.34 | 54.79 |
KRG92460 | Soybean | cytosol, plastid | 53.99 | 51.57 |
KRH34338 | Soybean | cytosol, plastid | 53.05 | 50.45 |
Solyc03g083500.2.1 | Tomato | cytosol | 49.3 | 48.61 |
KRH38734 | Soybean | cytosol, plastid | 49.77 | 47.75 |
PGSC0003DMT400072045 | Potato | extracellular | 47.42 | 47.42 |
PGSC0003DMT400059241 | Potato | cytosol, plastid | 47.89 | 47.22 |
Solyc06g034410.2.1 | Tomato | cytosol | 47.42 | 46.76 |
KRH09236 | Soybean | cytosol | 38.97 | 45.86 |
KRH65296 | Soybean | cytosol | 46.95 | 45.66 |
Solyc03g083490.2.1 | Tomato | plastid | 45.54 | 45.33 |
PGSC0003DMT400059243 | Potato | cytosol | 45.07 | 44.86 |
Solyc01g091250.2.1 | Tomato | cytosol | 45.07 | 44.44 |
PGSC0003DMT400066768 | Potato | extracellular | 35.68 | 41.3 |
AT5G62280.1 | Thale cress | cytosol | 45.54 | 41.1 |
Bra035898.1-P | Field mustard | cytosol | 46.01 | 40.16 |
Bra010072.1-P | Field mustard | cytosol | 45.07 | 39.51 |
CDY69766 | Canola | cytosol | 45.07 | 39.51 |
CDY00273 | Canola | cytosol | 45.07 | 39.51 |
CDY16780 | Canola | cytosol | 45.07 | 39.34 |
CDY69982 | Canola | cytosol | 44.6 | 38.93 |
CDX87243 | Canola | cytosol | 44.6 | 38.93 |
Bra029269.1-P | Field mustard | cytosol | 44.6 | 38.78 |
CDX86908 | Canola | extracellular | 41.78 | 35.32 |
GSMUA_Achr8P19380_001 | Banana | cytosol | 29.11 | 28.57 |
GSMUA_Achr6P13950_001 | Banana | mitochondrion | 32.86 | 28.34 |
GSMUA_Achr8P08470_001 | Banana | cytosol | 28.64 | 27.23 |
GSMUA_AchrUn_... | Banana | cytosol | 27.7 | 27.06 |
GSMUA_Achr5P18770_001 | Banana | cytosol | 27.23 | 26.73 |
GSMUA_Achr11P... | Banana | cytosol | 17.37 | 15.88 |
Protein Annotations
EnsemblPlants:GSMUA_Achr5P18780_001 | EnsemblPlants:GSMUA_Achr5T18780_001 | EnsemblPlantsGene:GSMUA_Achr5G18780_001 | Gene3D:3.40.50.150 | InterPro:DUF1442 | PANTHER:PTHR33593 |
PANTHER:PTHR33593:SF3 | PFAM:PF07279 | UniParc:UPI000296AA7E | UniProt:M0SZQ7 | MapMan:35.2 | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G18780_001]
Coordinates
chr5:-:20299762..20300502
Molecular Weight (calculated)
22417.8 Da
IEP (calculated)
5.335
GRAVY (calculated)
0.062
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MVWSAENATK AFLRTLKLGN KAKEPDLTEF VSALAAGSGA RLMVEVCADS AGPTTLALIA AADQTGGRIA CIVRGPDELH SSLEALGPDA GRVDLVVGDA
101: QHLLLGEYRG ADFVLVDCAS EEHERVFRAA QLGAMEACGG VVVGHNAFCE SSSPSVDALG GLRVDLLPIG GGLRVSRVPP AGKRSQWVVR VDECTGEEHV
201: FRITSPRKKW IEA
101: QHLLLGEYRG ADFVLVDCAS EEHERVFRAA QLGAMEACGG VVVGHNAFCE SSSPSVDALG GLRVDLLPIG GGLRVSRVPP AGKRSQWVVR VDECTGEEHV
201: FRITSPRKKW IEA
001: MAFWSAENAT KAYLSTLKTD QRTKEPNVAE FISALAAGNS ARKIAVACAG AANADILVAL IAAANQTRGQ VVCVLRGIEE LIISQKMLEP SEIHQIQFVV
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA
Arabidopsis Description
At5g62280 [Source:UniProtKB/TrEMBL;Acc:Q9LVA8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.