Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- peroxisome 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400059243 | Potato | cytosol | 92.06 | 92.06 |
| Solyc06g034410.2.1 | Tomato | cytosol | 66.36 | 65.74 |
| Solyc03g083500.2.1 | Tomato | cytosol | 52.8 | 52.31 |
| Solyc01g091250.2.1 | Tomato | cytosol | 46.26 | 45.83 |
| GSMUA_Achr5P18780_001 | Banana | cytosol | 45.33 | 45.54 |
| Solyc01g095920.2.1 | Tomato | cytosol | 30.37 | 28.63 |
| Solyc08g007480.1.1 | Tomato | cytosol | 27.57 | 27.06 |
| Solyc08g079480.2.1 | Tomato | cytosol | 27.57 | 26.94 |
| Solyc10g018200.1.1 | Tomato | cytosol | 26.17 | 25.0 |
Protein Annotations
| EnsemblPlants:Solyc03g083490.2.1 | EnsemblPlantsGene:Solyc03g083490.2 | Gene3D:3.40.50.150 | InterPro:DUF1442 | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF3 |
| PFAM:PF07279 | UniParc:UPI0002768B13 | UniProt:K4BIC5 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3:+:53418084..53418844
Molecular Weight (calculated)
22904.9 Da
IEP (calculated)
7.935
GRAVY (calculated)
0.157
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MACWSAENAT KAYLRAIKMG KSAKEPEMAE FISALAAGNN AQLMIVACAG AADSATVLAL VAAAHQTGGR VICIIGLACQ LIQSIESLGH NSRFVEFVTG
101: DVNTLLMSEY READFVLIDC NLNKCEGIIQ TARMMGENVS VLGYNALCMD SWRCQSFNAH LLPIGEGLLV TSNKTAKKGG NLGVSGKKSK WIVKVDKCTG
201: EEHVFRIRGK TVEA
101: DVNTLLMSEY READFVLIDC NLNKCEGIIQ TARMMGENVS VLGYNALCMD SWRCQSFNAH LLPIGEGLLV TSNKTAKKGG NLGVSGKKSK WIVKVDKCTG
201: EEHVFRIRGK TVEA
001: MAFWSAENAT KAYLSTLKTD QRTKEPNVAE FISALAAGNS ARKIAVACAG AANADILVAL IAAANQTRGQ VVCVLRGIEE LIISQKMLEP SEIHQIQFVV
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA
Arabidopsis Description
At5g62280 [Source:UniProtKB/TrEMBL;Acc:Q9LVA8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.