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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • peroxisome 2
  • cytosol 3
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
EpiLoc:peroxisome
MultiLoc:cytosol
Plant-mPloc:cytosol, mitochondrion, nucleus, peroxisome, plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400032504 Potato cytosol 92.2 92.2
Solyc08g079480.2.1 Tomato cytosol 70.18 69.86
CDY15992 Canola cytosol 48.62 48.62
Bra019758.1-P Field mustard cytosol 48.62 48.18
CDX98072 Canola cytosol 48.62 48.18
Bra026975.1-P Field mustard cytosol 48.17 48.17
CDY26557 Canola cytosol 48.17 48.17
AT1G12320.1 Thale cress cytosol 46.33 47.64
AT1G62840.1 Thale cress cytosol 48.62 47.32
CDY21045 Canola cytosol 47.25 47.25
Solyc10g018200.1.1 Tomato cytosol 47.71 46.43
Bra016780.1-P Field mustard cytosol 46.33 46.33
CDY30071 Canola cytosol 43.58 46.12
CDY34691 Canola cytosol 46.79 45.54
CDY31260 Canola cytosol 45.41 45.41
CDY59673 Canola cytosol 46.33 45.09
Bra034527.1-P Field mustard cytosol 46.33 45.09
CDY25700 Canola cytosol 44.04 43.05
GSMUA_Achr8P19380_001 Banana cytosol 38.99 39.17
GSMUA_AchrUn_... Banana cytosol 36.24 36.24
GSMUA_Achr5P18770_001 Banana cytosol 35.78 35.94
TraesCS5D01G331400.1 Wheat cytosol, plastid 32.11 34.65
TraesCS5D01G331200.1 Wheat cytosol 32.11 34.31
TraesCS5A01G324500.1 Wheat cytosol 30.73 33.84
HORVU5Hr1G082620.1 Barley cytosol 31.65 33.82
TraesCS5B01G325100.1 Wheat cytosol 31.65 33.82
TraesCS5B01G325300.1 Wheat cytosol 31.19 33.66
TraesCS5A01G324300.1 Wheat cytosol 31.19 33.33
Solyc03g083500.2.1 Tomato cytosol 30.28 30.56
Os02t0455400-00 Rice endoplasmic reticulum, plasma membrane 37.16 30.22
EER97893 Sorghum cytosol 33.95 29.96
Zm00001d018712_P001 Maize cytosol 31.19 29.31
Solyc06g034410.2.1 Tomato cytosol 28.9 29.17
Solyc03g083490.2.1 Tomato plastid 27.06 27.57
Solyc01g091250.2.1 Tomato cytosol 25.69 25.93
Solyc01g095920.2.1 Tomato cytosol 25.69 24.67
GSMUA_Achr11P... Banana cytosol 24.77 23.18
Protein Annotations
EnsemblPlants:Solyc08g007480.1.1EnsemblPlantsGene:Solyc08g007480.1Gene3D:3.40.50.150InterPro:DUF1442PANTHER:PTHR33593PANTHER:PTHR33593:SF2
PFAM:PF07279UniParc:UPI000276C639UniProt:K4CIN5MapMan:35.2::
Description
No Description!
Coordinates
chr8:+:2046022..2047493
Molecular Weight (calculated)
23955.9 Da
IEP (calculated)
8.951
GRAVY (calculated)
-0.159
Length
218 amino acids
Sequence
(BLAST)
001: MKLVWSPEKA SKAYLDTVKS CGLLPESTEA ELISAMAAGW NAQMIVETWS RSGATSTSIG LSNAIQQTGG RHICIVPNED TKREYKSTIE KITGMSPEIV
101: IGEAEETLKT LTGIDFLVVD CERNDFSTIL KVVTLGNRGA VLVCKNVSSR AVTDFRWRSV LDEKSRIVRS VFLPVGKGLD IAHVGAVSTG KSVSGGKMER
201: KWIRRFDRES GEEFVIRK
Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)
001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.